Thamnophis sirtalis (common garter snake): 106553800
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Entry
106553800 CDS
T06107
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106553800 (CAPRIN2)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106553800 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
106553800
NCBI-ProteinID:
XP_013927845
UniProt:
A0A6I9YW70
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MVQLSQSPLRRPSPSCHSEEGEEKSMKPDKQQVTQGPRGDNQPPMSPLQAALNSAATASQ
AYETYIDNGLICLKHKIRNIEKKKLKLEDYRDRLKRGEVLNQDQLEAVEKYEEVIHNLEF
AKELQKTFSGLSQELLKAQRKAQRRETLLKLEAEKKKLRTILQVQYVLQNFTQEHVQKDF
RSGLNGAIYLPSKELDYLIKFAKLTCSERNETVSIEDQMEQSSLYFWDLLEGSEKVVVGT
TYKHLKDLLSKLIDSGYFENIPTPCNKPEKKELREEMLEKPKQLSKPESVNEIESQRQHV
KSEIQPQEFLNRRYLPEADCTVKPEGTKHWEIEHTTKSDPPKSWEMLVDVEEEEQKRQNP
DSTKSLESVNQEGKKKLELSRPWELPLQEVDDHKQDVPKPWVAPVREEQASSKSWVTKEK
EQQEPKQEDPKPWVTKTKGGLEQNQEKPKMWVSQTNMDTLKKTEPAKSWDARVQDEKQQP
EKPWVGHIGEEDEQKSQPPKAWETSERSQQVVQQPLQNPPKIWGVGNLVPKDQTEPKKLD
GELKEGGKTGGVNEHSIDGSKKKGSFQSIGEPCKLPRNIQNVMQVAKPVHQTAAEFCSTS
SLPKDPILRREKLQDLMTQIQGTYNFMQESLLDFDKPSQSAGCSSQASSVDSSASNEQLS
SQNDFPEQSMQSASSPVTLHGSNTSLISDNTLSGSETELHSPQVPTPLSSESQTPLTSSR
TTVSPVHQGNVFQSPPSSSNAVNVKAPPFQAMQTVFKVNAPLPPRREQDAKENSLHSTGY
NQNFSTASTQTPPPCKLPSTQNAEQTTFSQESLSNAGTCQAEGAVPVSNGTLTFYAAQTA
TFPRPSQPFIGNRGSIRGSLRGVRSMNNSYRSPGGYKGFEPYRGSPSIPNGTYSQLQLPG
RDYSSVQYSQRDVNYQPNYKRGGINSGRTNSRAGWNDSSQVSSPERDNEMFNSGETGQGD
SRSITPVDIPVTSQAATLLPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNL
GETFDIQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETA
SNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaactttcacagtcccccctccgccgcccttcaccttcatgccactctgaggaa
ggggaagagaagagcatgaagccagataagcagcaggtgacccaaggtcctcgaggggat
aaccagcctcccatgagccccctgcaggcagctttgaattctgcagccacagcttctcag
gcatacgagacttacattgataatggacttatctgcttgaaacacaaaattaggaatatt
gaaaaaaagaagctcaagttagaagactacagggatcggctgaaaaggggggaggtcctc
aatcaagatcagttggaagctgttgaaaaatatgaagaagttatacataacttggagttt
gctaaagaacttcagaagacattttctggactaagtcaagagctactaaaagcacagcgg
aaagcgcaacgaagagaaaccttactgaaacttgaagccgagaagaaaaaactccgcaca
atactgcaggtccagtatgtgctgcagaatttcactcaagagcatgtgcagaaagacttc
agaagtggcttgaatggtgcaatatacttgccttctaaagaattagactacctcattaag
tttgcaaaattgacatgttcagaaagaaatgaaactgttagcattgaagaccaaatggag
cagtcatcactctatttctgggacctgctagaaggcagtgaaaaagtagtggttgggaca
acctataagcatctgaaggatttgttatcaaaattaatagattctggatattttgaaaac
attcctaccccttgcaacaaaccagaaaaaaaagaactgagagaagaaatgcttgaaaaa
cccaaacaattatcaaaaccagaatctgtcaatgaaatagaatctcagaggcagcatgtt
aaatctgaaatacaacctcaagaatttcttaataggcgctatttgcctgaagcagactgt
actgtcaagccagaaggaaccaaacactgggaaatagaacatactacaaaaagtgatccc
cccaaatcctgggaaatgctggttgacgttgaagaagaggaacagaaaaggcaaaatcca
gactccacaaagtcattggaatctgtaaaccaggaagggaagaagaagctggaactttca
cggccttgggaattgcctcttcaagaagttgatgatcataagcaggatgttccgaagcct
tgggtggccccagttagagaagagcaggcctcttccaaatcctgggtaacaaaagagaaa
gaacagcaggaaccaaagcaagaagatcctaagccttgggtaactaaaactaaaggagga
ttggaacaaaaccaggaaaagccaaaaatgtgggtgtctcaaactaatatggacactttg
aaaaaaaccgaacctgcgaagtcttgggatgcacgtgtccaagatgagaaacagcaacct
gaaaagccatgggtggggcatataggagaagaggatgagcaaaaatcccagcctccaaaa
gcttgggaaacatctgaaagatcacagcaagtggtccagcagccattacagaatcctcct
aagatctggggagttgggaatcttgtaccaaaggatcagactgagccaaagaagcttgac
ggggaactgaaagaaggtggaaagacaggtggagtaaatgaacacagcattgatgggtca
aagaaaaaagggagctttcagtcaattggagaaccatgtaaattacccaggaatatccaa
aacgtcatgcaggtagctaagcctgtgcaccaaacagctgcagagttttgctctacttct
agccttccaaaggatcccatcctcagaagggaaaaactgcaagatttgatgactcaaatt
caggggacttacaatttcatgcaggaatcacttctggattttgataaaccttcacaaagt
gctggctgttcatcacaagcatcttctgttgattcttctgcttctaatgaacaactttca
agccaaaatgatttccctgaacaatcaatgcagagtgcttcttctcctgtgactttgcat
ggatcaaacacttccttaatttctgataacaccttgtctggatcagaaactgaacttcat
tcaccacaggttcctactccactttcaagtgaatcacagaccccactgacatcctcaaga
actaccgtatcaccagtacatcaggggaacgtttttcaatctcctccatcaagtagcaat
gcggttaatgtaaaagcacctccttttcaggctatgcagactgtgttcaaagtgaatgca
cctttgccacctcgtagagagcaggatgcaaaagagaattctctgcattccacaggatac
aatcagaatttttcaacagcaagcacacagacgccacccccatgtaaattaccatcaact
caaaatgcagaacaaacaactttttcccaagagtctctttcaaatgcaggtacttgccag
gctgagggagctgttcctgtcagcaatggtaccctcactttttatgcagcacagacagcc
acttttcctagaccatcacagccttttattggaaaccgtggatctatcagagggtctctc
aggggtgtaagatcgatgaacaattcttatcgctctcctggtggatacaaaggttttgaa
ccttacagaggatcgccttcaatccctaatggaacctatagccaattacagcttcctggc
agagattattcttcagtgcagtattctcagagggatgtgaattatcaaccaaactataag
cgaggaggtattaatagtggtcgaactaattcaagagcaggatggaacgattcttctcag
gtgagcagtccagagcgtgacaatgagatgtttaacagtggggagactgggcagggtgat
tcccgcagcatcactcctgtcgatatacctgtgacaagccaagcagccaccctactacct
gtacacgtctatcccctcccacagcagatgagagttgccttttctgctgctagaacttct
aacttggctcctggaactttagatcaacccatcgtgtttgacctcttgttaaacaatctt
ggcgaaacctttgatatacaacttggtaggttcaattgtcctgttaatggtacttatgta
ttcatattccatatgttgaagctagctgtgaatgtaccattatacgtgaacctcatgaaa
aatgaagaggttttagtctctgcgtatgccaatgatggggctccagatcatgagactgca
agcaaccatgcagtcctccagctctttcaaggagaccagatttggctacgccttcataga
ggagctatttacggaagtagttggaaatattctaccttctcaggatatctcctgtatcaa
gactga
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