Thamnophis sirtalis (common garter snake): 106553867
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Entry
106553867 CDS
T06107
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106553867 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106553867 (DHX15)
03009 Ribosome biogenesis [BR:
tsr03009
]
106553867 (DHX15)
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106553867 (DHX15)
Spliceosome [BR:
tsr03041
]
Complex A
U2 snRNP components
U2 related factors
106553867 (DHX15)
Complex B
106553867 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106553867 (DHX15)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
Helicases
106553867 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106553867
NCBI-ProteinID:
XP_013927922
UniProt:
A0A6I9YUD9
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MVCENNLQGLSPKTLSDKRQHRLQLLEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPP
QQQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE
SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL
KKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKM
VIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF
KQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALV
TGYFMQVTSSKIKGREVSGLVKIAPQYYDMSNFPQCEAKRQLDRIIVKLQSKEYSQY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtatgtgaaaataaccttcaaggattgagcccaaagacactgtcagataagaggcag
catcgcctgcagctgttagagatagatgaagcctgcaagaggataaagcgtgaaatcgat
gatctgggccccgaggttggtgacattaagatcatcccgttatattccacgcttccccct
caacagcagcagaggatttttgagcccccacctcccaaaaagcccagcggtgcaatcgga
cgaaaggttgttgtatccactaatattgccgagacatccttgacaatagacggcgttgtt
ttcgtcattgatcctggctttgcgaaacaaaaggtctacaatccgcgaatcagggtggaa
tctctgttggtgaccgcgatcagcaaagcttccgctcagcagagagccggccgcgcaggt
cgtactcgccccgggaaatgtttccggctatacacagagaaggcgtacaaaacagagatg
caggacaatacctatcctgagattctgcggtccaacttgggttctgtggtgttacagctg
aagaaacttggtatagatgatttagttcacttcgattttatggatccaccagctccagaa
actttgatgagagccttagagcttctgaattacttagccgctttaaacgatgacggagac
ttgactgaacttggctccatgatggcggagtttcctcttgacccgcagctggctaaaatg
gttattgcaagttgcgactacaactgttctaatgagattctatctattactgccatgctg
tcagtcccacagtgttttgttcgccccacggaggccaagaaagccgcagacgaggccaag
atgagattcgcccacatagacggagatcatttgacgttgctgaatgtctaccacgctttc
aaacagaatcatgaatcggttcaatggtgctatgacaacttcattaactacaggtccttg
atgtcagcggacaacgtacgccaacagctgtcacgaatcatggacaggtttaatttgcca
cgtagaagcacagacttcacaagcagggactattacatcaatatacgaaaagccttggtg
accggttacttcatgcaggtaacgtcctccaaaataaaaggaagggaagtctctgggttg
gtgaaaattgctccccaatattacgacatgagcaacttcccccaatgcgaagccaagagg
cagctggaccgtatcatcgtcaagctccagtccaaggaatactcgcaatactga
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