Thamnophis sirtalis (common garter snake): 106553905
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Entry
106553905 CDS
T06107
Symbol
FBXO42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106553905 (FBXO42)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106553905 (FBXO42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
106553905
NCBI-ProteinID:
XP_013927967
UniProt:
A0A6I9YUI5
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MANSESDDDSFMAVDSEDAVAEGSMDQEDGLCAARPEEEEEEEEGGARPHRSMQELPEEV
LEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKSVQEGNIQWESRTYPYPGT
PITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPK
AGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCVVTTHGPPPMAG
HSSCVIQDRMIVFGGSLGSRQMSSDVWVLDLEHWTWSKPNISGPGPHPRGGQSQIVIDDE
TILVLGGCGGPNALFKDAWLLHMRSDRPWAWQTLKVENEDHGAPELWCHPACKVGQCVVV
FSQAPSGRAPLSPSLNSRPSPISATPPALLPETRECRSQSPVRTADEAPCVNGRWGTLRP
RGQRPTPCVSREGSLSPARDDSSPVLNGSEALSPGITAAVGGVSPDSPLQLLSPSTASIA
EGYEPKAGLSLAPRRGSLPDQKDLRLAAVDLNWEAKPPSLVCQLDGAESRTVGTIGLRNP
PDQTNGIHTPPHVSSCLTGAVSPSALRRSLEAVQALSSKALPTLAVRSPPRGSSPGSPGS
QSSANPAEAAVSATARSSSAQGDAHALPPIARRLGHHPPQSLNVGKPLYQSVNCKPMQMY
VLDVKEVKGRGRVQWKVFHGSSVVGPPETSLHTVVQGRGEVIIFGGLMDKKQNVKYYPKT
NALYFVRAKR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggctaactcagagagcgacgacgacagcttcatggctgtggattccgaggacgccgtg
gcagaagggagcatggaccaggaggatggcctgtgtgctgctcgcccagaggaagaagaa
gaggaggaagagggaggggctcgtcctcaccggtccatgcaggagttgccggaagaggtg
ctggagtatattttgtccttcctctccccgtatcaggagcacaaaacagccgccctcgtt
tgcaagcaatggtatcgactcatcaaaggtgtcgcccaccagtgttaccacggctttatc
aagtccgtccaggaagggaacattcagtgggagagccgcacctatccctatcccgggact
cccatcacccagcgcttctcgcacagtgcttgttactatgatgccaatcagtccatgtac
gtcttcgggggctgcacccagagcagttgcaacgcagcttttaacgacctctggagactt
gacctgaacagcaaggaatggatccggcccctggcctcaggttcctacccgtcgccaaag
gccggagcgacccttgttgtgtataaggacctgctggtgctgttcggcggctggacgcgg
ccaagcccttaccccctgcatcagccggagaggttctttgacgaaatacacacctactcg
ccttccaaaaattggtggaactgcgtggtgaccacccacggccctccacccatggccggc
cactcctcctgtgtgatccaggaccggatgattgtcttcggaggctctctggggtcgcgg
cagatgagcagcgacgtctgggtcctcgatctggagcactggacctggtccaagccgaac
atctccgggcctgggcctcatccgcgaggaggccaatcccagattgtcatcgacgacgaa
accatcctggtccttgggggctgcggaggtccaaatgcgcttttcaaggacgcctggctg
ctgcacatgagatccgaccggccgtgggcgtggcagaccctgaaggtggagaacgaggac
cacggagcccctgagctgtggtgccacccggcatgcaaggtggggcagtgcgtggtcgtc
ttcagccaagcccccagcgggagggcgccgctcagccctagcttgaactctcgtccttct
cccatcagcgccacaccgcccgccctgcttcccgagacacgagaatgccgctctcagtct
ccagttcggaccgctgatgaggctccatgcgtgaatggccgctggggcaccctgagaccc
cgagggcagaggccgacgccctgcgtgtcccgggaaggaagcctgtcgccggccagggac
gatagttcgccggtgctgaatggcagcgaggccttgtctcctggcatcaccgccgccgtg
ggtggggtttctccagacagccctctccagctgctctcgcccagcacggcttccattgcc
gaaggctacgagccaaaggcgggcctttctttggcacccagacggggttctctccccgat
cagaaggacctgcgcctggcagccgtagacttgaactgggaggctaaacccccttctctg
gtctgccagctggatggtgcggagagcaggacggttggcacgataggcctcaggaatccc
ccggatcagaccaacggcattcacaccccgcctcatgtgtccagttgcctgacaggagcc
gtctctcctagtgcgctgcggcggagcctagaggcagtccaagcgctctcttccaaggcc
ctgcccactctggcggtcagaagcccgcccagagggtcctcgccagggtccccaggcagc
cagagcagcgccaaccccgccgaagccgccgtctctgctaccgctcgatccagctctgcc
caaggggacgctcatgccttaccacccattgctcgtcgcctgggccatcacccgcctcag
tcgctgaacgtgggcaagcccctttaccagagcgtgaactgcaagcccatgcagatgtac
gtgctggacgtgaaggaggtcaaagggcgcggacgggtccagtggaaggtgttccatggt
agctcggtggtggggccccccgagactagcttgcacacagtggtccaggggcggggggaa
gtcatcatctttggcggcttgatggacaagaagcagaacgtcaagtactatcccaaaacg
aacgccttgtactttgtgcgggcaaagagataa
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