Thamnophis sirtalis (common garter snake): 106554007
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Entry
106554007 CDS
T06107
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106554007 (APEX2)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
106554007 (APEX2)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
106554007 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
106554007
NCBI-ProteinID:
XP_013928080
UniProt:
A0A6I9YWV0
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
HSGAVGCYGSTEDFTVDELKALDSEGRAVITRHRICTSEQRETLLTVINVYCPRADPEKP
ERGDFKLQFYRLLQARAEALLRAGGHVIILGDINTAHRPIDHCDPGDLESFQEHPGRRWL
DGFLWEPGRDSEKENLFVDTFRFLNPNQDEAYTCWCNVTGSRHVNYGTRIDYILADRALA
LLELTDAQIMPEVLGSDHCPVQAVLKSTCLAAPRCPPLCTRFLPEFAGTQQKLSRFLVKV
EQTQLPGKAQKRSKAERTAVGDLKKRRTGPAQEGQGDLRSFFKAGNLGAESVDDGRGRSV
LNVVQRAEAEDSGKQPPMERAERIADKCGVEKVSGVTRIPVKSPKKAPSKGVTSKAAMNC
EKNTPPSTQNQSLLWKSLLPGPAQPPYCKGHKEPCVLRTVKKQGPNCGRRFFVCARPLGK
PSDPRARCDYFLWAS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
cacagtggagcagtcggttgttatggaagcacagaggacttcacagttgatgagctcaag
gccctggacagtgaaggccgggcggtcataacccgtcaccgcatatgcacttcagaacag
cgggaaactctgctgactgtcatcaatgtgtattgccctcgcgctgaccctgaaaagcca
gaacgtggagacttcaagttgcaattctaccgcctcttgcaagcccgggctgaagctctt
cttagagctggaggccatgtgatcatcctgggagacatcaatactgcacacaggcccatc
gatcactgtgatccaggagacttggaatccttccaggagcatcctgggcgccgctggctg
gacggcttcctctgggagcctggcagagattctgagaaggagaatctctttgttgatact
ttccgctttctgaacccgaatcaggatgaagcctacacttgctggtgtaacgtaacagga
tcccggcatgtgaactacggtacccgcattgactacatcctggctgatcgtgcactggca
ttgttggaactgaccgatgcccagattatgccagaggtgttgggctctgaccactgtcct
gtccaggctgtgctgaaaagtacctgcttagctgccccacggtgtcccccgctctgtacc
cgcttcctgcctgagtttgctggcacccaacagaagctcagccggtttctggtcaaagtg
gaacagacccaactgcctgggaaggcgcagaaacggagcaaagcagagagaaccgccgtg
ggggatttgaagaaaaggcggaccggcccagcacaggaagggcaaggggatttgcgtagc
ttcttcaaagctgggaacttgggtgcagagtctgtagatgatggaaggggccggtcagtt
ttgaatgtggtccagagggcggaagcagaagattctgggaaacagcctcctatggagagg
gctgaaaggatagctgataaatgtggggtagagaaagtctcgggggtaacccggatacct
gtcaagagtccaaagaaagcaccctccaaaggtgtgaccagcaaggcagctatgaattgt
gagaaaaacacacctccctctacgcaaaaccagtctctgttgtggaagtcgctgctacct
ggccctgcacagccaccttactgcaagggccacaaggagccctgtgtgttgcggacagtg
aagaaacaaggaccaaattgtggacggcgcttcttcgtctgtgcccggcctctggggaaa
ccctcggatccccgtgcacggtgtgactacttcctgtgggccagctaa
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