Thamnophis sirtalis (common garter snake): 106554032
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Entry
106554032 CDS
T06107
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tsr00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
106554032
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
106554032
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsr01003
]
106554032
Enzymes [BR:
tsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
106554032
Glycosyltransferases [BR:
tsr01003
]
O-Glycan biosynthesis
Glycosaminoglycan
106554032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
106554032
NCBI-ProteinID:
XP_013928107
UniProt:
A0A6I9YUX6
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MRMFKAIYHQEHFYYIHVDKRSNYLHRQVLQFASQYPNVRVTSWRMATIWGGASLLSTYL
QSMKELLEMKDWPWDFFINLSAADYPIRTNDQLVAFLSRYRNMNFLKSHGRDNARSTTCD
SMGQHGCQMNLASLWNFHACSLSKLWGGCCCFSPQSFFHTVLENSPHCDTMVDNNLRITN
WNRKLGCKCQYKNIVDWCGCSPNDFKPSDFHRFQQTARPTFFARKFEAVVNQEVISQLDY
YLYGNYPSGTPGLRSYWENVYDEPDGIHTISDVALTLYHSFSRLGLKKAETSFHMDGDNS
CRYYPMGHPVSVHLYFLADHFQGFLIKHHTTNLAASKLETLETWVIPKKVFKIASPPSDF
GRLQFLEVGTDWDAKERIFRNFGGLISPTDEPVGMQKWAKGPNVTVTVIWVDPVNVIAAT
YDILIESSAEFTHYKPPLNLPLRPGVWTLKILHHWVPVAETKFLVSPLTFLNKQAIRQEE
ATKLHGGPPKNSYMEQSFQGLNPVLNI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgttcaaggctatatatcatcaggagcatttttattacatccacgtggacaag
cgttccaattatttacaccggcaagtgctccaatttgcaagccagtatccaaatgtgagg
gtcacatcctggcgcatggctaccatctggggaggagccagtcttctatccacctacctc
cagagcatgaaggagctcttggagatgaaggactggccgtgggacttcttcattaacctc
agcgctgcggactatcctatcaggacgaacgaccagcttgtagcattcctgtccagatac
cggaacatgaacttcttgaaatcccacgggagggacaacgcaagatccaccacatgtgat
agtatgggccagcatggttgtcaaatgaacctggcttccctgtggaatttccatgcctgc
tcgctgtctaaactctggggtggttgttgttgtttttccccacagtctttcttccacacc
gtcttggaaaacagtcctcattgcgacaccatggtggacaataacctgcgtatcacaaac
tggaaccgaaagctggggtgtaaatgtcagtacaagaatattgtggattggtgcggctgt
tcccccaatgattttaagccatctgactttcaccggttccagcaaactgcaagaccaacc
ttctttgcacgcaagtttgaggcggttgtcaatcaggaagtcatctcccagttggattat
tacctgtatggtaactatccttctggtaccccgggcctccgatcgtactgggaaaatgta
tacgatgaaccagatgggatccacaccattagtgatgttgcgctgactctctaccactct
ttttcccggttgggcttgaagaaagcagaaacgtccttccatatggatggtgacaacagt
tgtcgatactacccaatggggcatccagtgtcagtccatctctactttctcgctgatcat
tttcagggcttcctcatcaaacatcacacaaccaatttggctgccagtaaactggagacc
ttagaaacgtgggttatacctaagaaggtgttcaagattgcaagccccccgagtgatttt
ggaaggctacagttcttggaggtcggcacagactgggatgcgaaggagagaatattccgc
aattttggaggccttatttccccgacggacgagccggtgggcatgcagaagtgggcgaaa
ggccccaacgtcaccgtgacggtgatctgggtggatcccgtcaacgtcatcgccgccacc
tacgatatcctgatcgaatccagtgccgaattcacccattacaagccacctttgaattta
cccctccggcccggggtctggacgcttaaaatcctgcatcactgggtccccgtggcggag
accaaattcctggtctcacctctgacatttctgaacaagcaagccatccgacaagaagaa
gccacgaagctgcatggtggacctccgaagaactcctacatggagcagagcttccaaggg
ctcaaccctgtgctaaacatt
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