Thamnophis sirtalis (common garter snake): 106554044
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Entry
106554044 CDS
T06107
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106554044
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106554044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
ATG17_like
CA109-like
BLOC1_2
NPV_P10
Motif
Other DBs
NCBI-GeneID:
106554044
NCBI-ProteinID:
XP_013928120
UniProt:
A0A6I9YWY7
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
VIYRVLDPAIPIHDPYSAKIQKCNCNEHSHRCHFDMAAYLATGNVSGGVCDQCQHNTMGH
HCQFCKPFYYKDPTKDIRDPGMCRACDCDPDGTLDGGVCDTHDDPMLRLIAGQCRCKEHV
EGARCDRCKSGFSGLSAKNPQGCQRCQCDPRGTVQDGPQCDAITGDCFCKRLVSGRSCNQ
CLPEHWALSLDLYGCRPCDCDVGGAYDNQCARETGQCRCRSHMVGRQCNQVQTGYYRIVL
DHYTYEAEEARLHQFAGKWEKVKVSVVRPGPVPSGSPCGNIIPADDLISTALLPTSRYIV
LSQPVCLEQGIRYTIRVEFTHYGGREHLKGAAVLLDSLVLVPRYSSLEMFIAGDAASIAR
KETFERYRCAQQAHPVIKGPTPEACAKLLTSMSAIIHQGALPCQCDLQGSLSLECNPSGG
QCQCKPHVMGRRCERCAPGTFGFGPGGCKSCQCSSQGSQSSFCDNFSGQCPCRAGVFGLR
CDHCQAGHWGFPNCRPCQCNGRAEECEQRTGSCLHCRGHTEGNWCERCVSGYYGNPALSL
GGQCRPCPCPEAPGSGRNFAVTCHQDNPSGTVRCSCLGGYTGPRCDECAPGYYGNPWQVR
GRCQPCTCNNNIDLADPKSCDRRTGQCLRCLYHSEGDQCQHCQRGYYGDATQHTCRRCSC
NYLGTVQNKCSSQDQCQCDRHSGQCQCLPNVQGQNCDRCAPNFWNLTSGQGCQPCDCHSY
YSLSPACNQFTGQCQCRPGFGGRTCSECQENHWGQPGQQCRACDCDPRGIEKPQCHRTTG
HCSCRPGVSGVRCDQCSRGFAGDFPACQPCHQCFGDWDRIVQDLAAHTRNLMQRAQQLHQ
TGLAGAFEGPFRRLQDKLSAIQAVVSARNATATAIAHLLHNMDDIRQEIADITETLTQLE
GLLTATQDKNFNANHGLGILERGVRSLNLSLADLKHQLNILINTNVLGVYDSVRQSFVQS
REAEHQANASTLAVPSPVSQSAATRRRTEHLMMSRREAFNRQNAANRRGLVDLSTRTRGL
SLDLINEKVREHENRMFLVC
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
gtcatctatagagtactggatccagccattccaatccatgatccctacagtgcaaaaatt
cagaaatgcaactgcaatgaacattcccaccggtgccacttcgacatggctgcgtacctg
gccacgggcaacgtcagcggtggggtctgcgatcagtgccagcacaacaccatgggccat
cactgccagttctgcaaaccattctactataaggatcccaccaaggatatccgtgatcct
ggcatgtgcagagcttgtgactgtgaccctgatgggacgttagacggcggagtgtgtgac
acacacgatgatccaatgctgaggctgatagccggacagtgtcggtgcaaggagcacgtg
gagggagcccgctgtgacagatgcaaatctggattctccggactgagtgcaaaaaaccca
caaggatgccagcgctgccagtgtgatccccgaggcacagtgcaagatggcccccaatgt
gatgctatcacaggcgattgcttctgcaaacgcttggtttctgggcgcagctgtaatcag
tgcctgccagaacattgggctttgagtctggatctgtatggctgccgtccttgtgattgc
gatgtagggggtgcctacgacaaccaatgtgccagagaaacaggacagtgtcgctgccgt
agccatatggtgggccggcagtgcaatcaagttcagactggctattatcgcatcgtgttg
gatcactatacctacgaggcagaagaagcccgcctccaccagtttgcaggaaaatgggaa
aaagtgaaggtgtctgtggtgcgacctgggcctgtccccagcggtagtccatgtggaaac
atcatccctgctgatgacttgatatctactgctctcttacccacatcccggtacattgtg
ctgtcacagccagtctgtctagaacaaggaatcaggtacaccataagagtagagtttacc
cattacggaggacgtgagcatttgaaaggcgctgctgtactattggactctttggttctg
gtgccacgttactcctccttggagatgttcattgccggggatgccgcctctattgctcgc
aaagagacctttgagcgctaccgctgtgcccagcaggctcaccccgtgattaaggggccc
accccggaagcttgcgccaagttgctcaccagcatgtcagccatcattcaccagggggca
ctcccctgccagtgtgatctccagggatctctgagtctcgagtgcaacccaagtggcgga
cagtgtcagtgcaagcctcacgtcatgggccgccgctgtgaacgctgcgctcctggcacc
ttcggctttgggcctgggggatgcaagtcatgccagtgcagcagccaagggtcccagagc
agcttttgtgacaacttcagtggacagtgtccttgccgggcaggtgtttttgggcttcgc
tgcgaccactgccaggccggtcactggggcttcccaaactgccggccatgccagtgtaat
ggccgagcagaagaatgtgagcaacggacaggcagctgtttgcattgccggggccacacg
gaaggaaattggtgtgagagatgtgtcagtggctactatgggaacccagcgctgtccttg
ggtggccaatgccgtccttgcccttgccccgaggctcctggctccgggcgcaattttgca
gtcacttgccatcaagacaacccctccggaactgtgaggtgcagctgccttggaggttat
acaggcccgcgctgtgacgagtgtgctcctggttattatggcaacccctggcaggttaga
ggacgatgccagccctgcacctgtaataacaacattgatctggcagaccccaaatcctgc
gatcggcgcacaggccaatgccttcgctgcctctaccatagcgagggagaccagtgccaa
cactgccaaaggggttactatggcgatgcaacgcaacacacctgccgccgttgctcttgt
aactatctgggtactgtgcagaacaaatgctcctcgcaagaccagtgccaatgtgaccgg
cacagtgggcagtgccagtgcctacccaatgtccaaggacagaactgcgaccgttgtgcc
cccaacttctggaacttaaccagtgggcagggctgccaaccctgcgattgccattcctat
tactcactgagccccgcttgtaatcagttcacagggcagtgccaatgccggccaggattc
ggaggccgcacctgttccgagtgccaggagaaccattggggtcagccgggtcagcaatgc
agagcctgcgattgtgatccacgtgggattgagaagccgcaatgtcaccggactactggg
cattgctcctgccgcccgggggtgtctggcgtgcgctgtgaccagtgctcccgtggtttt
gctggcgatttccctgcctgccagccctgccaccaatgttttggagactgggatcgcatt
gtgcaagatctggctgcccacactcgcaacctgatgcagagggctcaacagctccaccaa
acggggcttgctggcgctttcgagggtcccttccgtcggctgcaggacaaactgagtgcc
atccaggctgtggtcagcgctcgcaatgccaccgccactgcgattgctcacctcttgcat
aatatggatgatatacggcaggagatagctgatataacagaaacactgacccagctggag
ggattgctgacagccacccaggacaagaattttaatgccaaccacgggctgggcatcctg
gagcgtggagttcggagcctcaatctcagcctagcagacctgaaacaccagcttaacatt
ctcataaacaccaacgtgttgggggtctatgacagcgtccgccagtcctttgtgcagtca
cgcgaagcagagcaccaggcaaatgcctcgaccttggctgtgcccagccccgtcagccaa
tcagctgctaccaggcgtcgcacagaacacctgatgatgtcccgaagggaagctttcaat
cggcagaatgccgccaaccgccgagggctggtggacctctcgacgcgcacccgagggctc
agcctggatctgattaatgagaaggtgagggagcacgagaacaggatgtttctagtctgc
taa
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