Thamnophis sirtalis (common garter snake): 106554106
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Entry
106554106 CDS
T06107
Symbol
TMC4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106554106 (TMC4)
03037 Cilium and associated proteins [BR:
tsr03037
]
106554106 (TMC4)
Transporters [BR:
tsr02000
]
Other transporters
Pores ion channels [TC:
1
]
106554106 (TMC4)
Cilium and associated proteins [BR:
tsr03037
]
Other cilia and associated proteins
Stereociliary proteins
106554106 (TMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF3963
DUF4223
Motif
Other DBs
NCBI-GeneID:
106554106
NCBI-ProteinID:
XP_013928183
UniProt:
A0A6I9YUC6
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MEDDFRESSLRSQEEETEFDGGQQVPPSLLLQLPSNQTLRFRGKKAEAWEEAWKEALAPT
EDPHEVLLEEGEDSRLLKELPLCLEEKRKLRMLQKQAVKQLSGWQLWRIEKLKTLRHLQS
QASTAISSARLWRGTLHHIEGHFGTGIQSFFNFLRFLVLMNFVASLLVVGFVIAPNAAFE
ALQLNWTSQANSSLVNALCQKYNPIPQGLVSYFSYILDLLSGQGFIEQTYLFYGYYPNMA
VSFVNFAYDIPLAYLLTTLFYLLFCLAWIVRRSVLCLKQSLVSEDTSLASYSNKVFAGWD
FSLMQDNMVQLKHKSIRYELRMDLEEASFRQHQAELTTSERVGLYLLRSLINILVLALLG
ASFYCIFLAVSYSQEMLGKADSPENSLFFLDLLVAYLPSAVITAANLLVPMIFEFLVPLE
KYPLSFEIKITLLRNVVLRFASLIVVLVTLWGQITCNGDMQNSDCRNCGYNNKLHPCWET
SVGQEMYKLMIFDLVIMLLVILLVEFPRKLLVTYWPSCLLLKWLGEQEFGVPDNILNLVY
GQTLCWTGALFCPLLPVLNTIKYIVIFYMKKLTLYANCRPAERTFRASSSNAFFLLILLL
GLTISCVPALYSIFVLPPSKACGPFRDQSTMWNVVTQAVSELPAGAQDFLRFVGSVAFSA
PLFLLLSVFMFYLKALANSYSSRIKSLKGQLRLEGQDKFFLVKQISELSQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatttcagggaaagcagtttaaggagccaagaagaggaaacagaatttgat
gggggccagcaggtccccccatcactccttctccagctaccaagcaatcaaacgctacgt
ttccgtggtaaaaaagcagaagcttgggaagaggcttggaaggaggcattggcgcccaca
gaggacccccatgaagtattgctggaagaaggggaagacagccggcttctgaaggagctg
cctctctgcctggaggagaaacgcaagctcagaatgctgcagaaacaggcagtcaagcag
ctcagcggttggcaactttggcgcatagagaagttgaaaacgctgcgccatcttcagagt
caggcaagcacagccatctcatcagctaggttgtggcgaggcactctgcaccacatcgaa
ggccattttggaacagggatccaatcttttttcaacttcctgcgtttcttggtcctgatg
aattttgtggcttccttgctggtggtaggatttgtgattgctccaaatgctgcctttgaa
gctctacaactcaactggacaagtcaagcgaatagtagtttggtgaatgcactatgtcaa
aaatacaatcccatccctcaaggcttggtcagctacttttcctatattctggatcttctg
tcaggccagggattcatagaacaaacttacctgttctacggctattatccaaatatggct
gtcagctttgtcaactttgcctatgacattcctctcgcttatctcctcacaacgctattc
tacttgctgttctgcctagcctggattgttcgcaggtcagtcctttgcctcaaacaaagc
ctggttagcgaagacacatcccttgcatcctacagcaacaaagtctttgctggctgggat
ttcagcctgatgcaagataacatggtccagttaaagcataaaagcatccgctacgagtta
cggatggacctggaagaagccagtttccgccagcaccaggcagagttgaccacatcagag
cgagttggcctttatctcctgagaagtctgatcaatatcttggttttagcgcttttggga
gcctccttttactgtatctttctggctgtgagctattcccaggagatgttgggaaaagca
gactctcctgaaaacagtctcttctttctggatctgctggtggcttatctcccttccgct
gtaatcacggctgccaatctccttgtcccgatgatctttgagttccttgtgcctcttgaa
aaatacccgctcagctttgaaatcaaaatcacacttctgaggaatgtcgtcttgcgtttt
gctagcctaattgtggttctcgttacactctggggacagatcacctgtaatggggacatg
cagaactccgactgccgcaattgtggttataataataaacttcacccgtgctgggagacc
tcagtggggcaggaaatgtacaaactgatgatctttgacttggtgatcatgctacttgtg
atattgttggtggagtttcccagaaagctgctggtgacttactggccatcctgcctcttg
ctcaaatggttgggagaacaggagttcggggttcctgacaacattttgaacctggtatat
gggcagaccttgtgctggactggagcccttttttgtcctcttctgccagtgctcaacacc
atcaaatatattgttatcttctacatgaaaaagctcaccctttatgccaactgccgtcca
gccgaacgcacgtttcgtgcttcaagctccaacgcttttttccttttaattctgctcctg
ggactcacgatatcctgtgttccagccctatatagcatcttcgttctgcctccttcaaaa
gcatgtgggccgttccgtgatcaatccaccatgtggaatgtggtcacccaggctgtgtca
gagttacctgctggtgcccaagacttcttgagatttgtgggctcagttgccttttctgcg
cccttgtttctgcttctgagtgtcttcatgttctacctcaaggccctggccaactcatac
agttccaggatcaaaagtctcaaaggacagctccgtctggagggccaggataagttcttc
cttgtgaaacagatttcagaattgagccaatga
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