Thamnophis sirtalis (common garter snake): 106554258
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Entry
106554258 CDS
T06107
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106554258
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106554258
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
EzrA
BLOC1_2
CCDC106
DUF948
EGF_Teneurin
MMS19_N
DUF1664
Laminin_II
YkyA
LXG
DUF7217
Laminin_I
COG6_N
TBCA
Motif
Other DBs
NCBI-GeneID:
106554258
NCBI-ProteinID:
XP_013928368
UniProt:
A0A6I9YUU5
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All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MDCSIPSVDGLLRSRSPLNGDGTQEPEQQWARNQSNNEYPGWRWAAILISPMTDLVKGCD
LGQNLGFTSLQLLILCRRHQMLDINQVFLLRQGSTTPGVAVHYRALSRLEPGRRSGRSTV
PISGFSDGPLRPESPVDCVEYYNGVQNGRRVRLRRQHSTIRLLQQRGALSRARQLQQKPD
VEVVQREHTGHMITWTGPGFARVRDGAGLSFDIDNIPYPMEYGILFRYEPESTEDWEVVV
SVSSQDLPVSPRCGNLLPSEQVYQGSLPHTSRYLLLPRPFCFEPRNRYKIIVRFQRAGVA
QRHPAAFILVDSLVLLPYVTELPGFHGDDPASVERREALEHYTCLELFRMATMPDLPETC
AHLLCSISAIIHDGALPCQCDLQGSTSSVCHKLGGQCQCKPNVMGRQCDRCIPGTYGFGP
YGCSSCACSPEGSVSKICDPVSGQCRCQQGIIGRQCDQCPLDQWGFPHCRPCHCNGHAEK
CDSHTGACQQCRDYTAGRHCERCLDGYYGDPVLGSGQQCRPCPCPGYPGSRHYHGISCQA
DRDTNQIVCLCAPGYTGPRCDRCSPGYFGSPGQEGGACRPCQCNNNIDPSDPEACDPHTG
QCLHCLYNTGGPRCAECQPGYYGNAFQRSCRRCTCNEIGTLPTHCSEGICHCDQTTGHCP
CRANVVEKNCDRCAQNFWGFGSDLGCQPCNCDPTHSLRADCNMFTGQCHCQPGFGGRVCS
HCQENHWGDPEEQCLACKCDPMGSESPQCDRLTGHCLCRGSFTGRNCNQCQRGFQKNFPH
CSPCHKCFGQWDLVLNQLNEQLQRLQDRVRALKEGGPIPEASNSRLRSLESSLAWVEQLL
MDGKSLSGPVLQQLNNLLADTRTDMDKLWENLQDTDSCLDSTERKVTEKRDQLNALNEQV
EELNQTVNYLRSQLGKMVNASFNESFRSIVEYFQQSEQALRQANTSVRGRQSPVVQAKHT
RLATVELLRQRGEAFRKGAAAHQKALNTIQRKVDALSLNRINQKICGGFGDEACEDAPCG
GASCKDTSGQRHCGGPNCTGALPVSIKALHSAQNISQQLETTASQLVTMVNKVQEVQNLA
RDARNHVQDILDHAQGARNQVEKSTAKLREFIQKIKDFLAEEGADPESIELVAQQVLNIP
QPISQSEIDSLIKEIWDRIGQLNRVDVILNCTVQNLTLARDLLTKAELAREKAEGVQETV
AETSGALDSAKNKVKAAEQALKKTKEAIQSVEGKVKQAVSQLETLLNKELRLELRLKDLA
QDVATLQKKSQDNQRQAQQATGKAERATNIALRLKNVRDPLASLLS
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggactgtagcattcccagtgtcgatggccttttgcgatcaagatcacccctcaatggc
gatgggacccaggaaccagagcagcaatgggccaggaaccagagcaacaatgagtaccca
ggttggagatgggctgctatcctgatctctcctatgacagacctggttaagggttgtgac
ttgggacagaacctgggttttacatccctgcagctcctcattctgtgtaggcgtcatcag
atgctggacataaaccaggtttttctcttaagacaggggtccacaactcctggggttgca
gtccactaccgggccttgagccgtttggaaccaggccgcagaagtggcagaagcaccgtc
cccatcagtggcttctccgatggtcccttgcgaccagaatcgcctgtggattgtgtggaa
tattacaacggagtccagaatgggcgcagggtgaggctgaggcgccagcacagcacaata
agactcttgcagcagcggggggcgctctcgagagcccgacagcttcaacaaaagcctgat
gtggaagttgtacagcgggaacacacaggccatatgatcacatggacaggcccaggcttc
gcccgtgtgcgcgatggggctggactctccttcgacattgacaacattccttacccaatg
gaatatggcatcttgttccgctatgaacctgagtccacagaagattgggaagttgttgtc
agtgtcagctcgcaggatctaccagtgagtccacgttgtggcaatttgctgccctctgaa
caggtgtatcaagggagcttgccccatacctccagatacttgcttctgccaaggcccttc
tgctttgagccgagaaaccgttacaagatcatcgtgcggttccagcgagcaggggtggca
cagcgccatcctgcagctttcatcctggtagactcgctggtccttttaccctacgtgaca
gaactacctggtttccatggtgacgatccagcttctgtggagcgccgggaggccctggaa
cactacacatgcctggaattatttcgcatggccaccatgcctgaccttcctgagacctgt
gcccacctgctctgcagcatttctgccatcatccatgacggggctctgccctgccagtgt
gacctccagggttccaccagcagcgtctgccataaactgggaggacagtgccagtgtaag
cccaatgttatgggtcggcaatgtgaccggtgtatcccaggcacttatggatttggacct
tacggctgcagttcctgtgcttgttcccccgagggctcggtctccaaaatctgtgacccg
gtcagtggccaatgccgatgccagcagggtatcataggacgccagtgtgatcagtgtcca
ctagaccagtggggcttccctcactgccgtccttgtcactgtaacgggcacgcagagaaa
tgtgattcacacaccggagcctgtcaacaatgccgagattatacagcaggccgccattgt
gaaaggtgcctggacggatactatggagacccagtcctgggatcagggcaacagtgtcgg
ccatgtccctgtcctggatatccaggttctcggcactatcacggcatttcgtgccaggct
gacagagacaccaaccagattgtttgcttgtgcgctcctggctacacagggccacggtgt
gatcgctgttcccctggctattttggaagccctgggcaggaaggtggtgcctgccgccct
tgtcagtgtaacaataacattgaccccagtgaccccgaggcctgtgacccacatactggt
caatgtctacattgcctttacaacactggtggaccccgctgtgccgaatgtcagcctggc
tactacggcaatgcctttcaacggagctgccgacgctgcacttgtaacgaaataggcact
ttgcccacccactgctccgaaggcatctgccattgtgatcaaactacaggccattgcccc
tgccgtgccaatgtggtggaaaagaactgcgacagatgtgcccagaacttctggggtttc
ggcagcgacttgggctgccagccatgtaactgcgacccgacccattccttgcgtgcagac
tgtaacatgtttacagggcaatgccactgccagccaggttttggaggtcgtgtttgttct
cattgccaagaaaaccactggggcgacccagaagagcagtgcttagcttgtaaatgtgac
ccgatgggctctgagagcccgcagtgtgaccgtctcactggacactgtttatgccgcggc
agctttacagggagaaactgtaaccagtgccaacgtggtttccagaagaatttcccccac
tgctctccctgccacaagtgctttggccagtgggatctcgtgctgaatcagctcaatgaa
cagctgcaaaggctgcaggacagagtgcgggccctgaaggaaggtggccccatacctgaa
gccagcaacagccgcctacgcagcctggagagcagcttggcttgggtggagcagcttctg
atggatggaaagagtctgagtggtcctgtgctgcagcagctcaacaacctcctagcagat
acaaggacagacatggataagctgtgggagaacctgcaagatacagattcgtgcctggat
agcactgaacggaaagtcacagagaagagggaccaactcaatgcattgaatgaacaagta
gaggaactgaaccagactgtcaactaccttagaagtcaactgggaaagatggtaaacgcc
agcttcaatgaatctttccgtagcatcgtggagtacttccagcagtcagaacaggccctg
aggcaggccaacacctccgttagagggcgtcaaagtcccgtggtccaagccaaacatacc
cggctggccacggtggagctgttgagacaaagaggagaggcttttcgcaagggagcagct
gctcaccaaaaggctctgaatactatccaacgaaaagttgatgccctcagcctgaacagg
atcaaccagaaaatctgcggaggttttggagacgaggcctgtgaagacgctccttgtgga
ggagcttcctgtaaggacacttcaggccaaaggcactgtggaggccctaattgtactgga
gctcttcctgtgtccatcaaggccctacattcggcccagaacatctcccagcagctggag
accacagcaagtcagctggtcaccatggttaataaggtgcaagaagtccagaacctggca
cgggatgccaggaaccacgttcaggacatcttggaccacgctcaaggagcacggaaccag
gtggagaaatccacagccaagctgagagaattcatccagaagataaaagacttcctagca
gaggaaggtgccgatccagagagcattgagctggtggctcaacaggtcctgaacattccc
cagcccatcagtcaaagtgagattgacagtctgattaaggagatctgggacagaatcggc
cagcttaacagagtggacgttatcctgaactgtacagtgcaaaacctaactcttgctagg
gatttgctgacgaaagcagaacttgccagggaaaaagcagaaggtgtacaggaaacggtg
gcggaaacctctggagcactggacagtgccaagaacaaagtgaaggcagccgagcaagcc
ctgaaaaagacaaaggaagccatccagagtgtggaaggcaaagtcaaacaggctgtgagc
cagcttgaaacactcctcaacaaggaactgcgactggaactgcgtctgaaagacttggct
caggatgtggccaccttacaaaagaagtcccaggacaatcagcgccaggctcagcaggcc
acgggaaaagctgagcgtgccactaacatagccctccggcttaaaaatgtgagagaccca
ttggcgtcattgctttcatga
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