Thamnophis sirtalis (common garter snake): 106554268
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Entry
106554268 CDS
T06107
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106554268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106554268
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-60S particles
RNases
106554268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
106554268
NCBI-ProteinID:
XP_013928385
UniProt:
A0A6I9YXP6
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MVAQTDGVAKKRDYEDEETGGEKRKAKRKRKNEKNDIHSNDQKMKLPSEVKTPCLSAWRF
GEGQITHEQLREFLKYATQGKQHNVTPPSWCRIHHQRHVAGVMVVILHHVDQLHFYRYYL
QFKHLRRTFKHRFSLPGLSGDFVKKLGLDTITRQQLSKEEKDGVPIIQKHAKKEHSLSSY
MLTRKEMRVYDYPVEGYGDRSHFVPTHCNGPIMDSSPLFGLDCEMCLTDKGSELTRIAVV
DTAGRCIMNELVKPKWPIRNYLTCYSGITEELLRPVQTTLAEIQSRLNDILPPDAILVGH
SLDADLRALEMIHPYVIDTSLLYARKGGKRFKLKFLAAAVLGKEIQNTGELGHDPTEDAQ
CALELAQYFIEQGSRKVGALALFTTVVLRTGMDVSFYPDTVLTVRTIDQWNRSCLQKW
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggttgcacaaactgatggagttgcaaagaaaagggattatgaagatgaggaaactgga
ggagagaaacggaaggctaaaagaaagaggaagaatgagaaaaatgacattcactcaaat
gatcagaaaatgaaacttcccagtgaagtgaagactccctgtttgtctgcttggaggttt
ggagaaggccaaatcactcatgagcaactgcgcgaattcctcaagtatgccacgcaggga
aaacagcacaatgtcactccgcccagttggtgtcgcatccaccaccaaaggcacgtggct
ggtgtaatggtggtcattttacatcacgtggatcagctccatttctaccggtactacctg
cagttcaaacatctccgaaggaccttcaaacaccgtttctctctgcctggcctctctggt
gacttcgtcaaaaaacttgggctggacacaatcacccgtcagcagctcagcaaagaagag
aaggatggagtccccataattcagaaacatgcaaaaaaggaacacagtctctcaagttat
atgttaacccgcaaagagatgcgcgtctatgattaccctgtagaaggttatggcgaccgc
agccattttgtcccgacgcactgcaacggcccgattatggatagcagcccgctcttcgga
ctggattgcgaaatgtgtctcaccgataagggatcagaactcacccgaattgccgtggtg
gacaccgccggtcgctgtattatgaatgaacttgtcaagccaaaatggccaatcaggaat
tacttgacctgttactcggggatcacggaggagttgctacgccccgtgcaaaccaccctg
gcagaaatccagagccgattaaacgatattctgcctccggatgccattttggtgggccat
tccttagatgctgatctccgagctctagaaatgattcacccgtatgttatagacacttcg
cttctctatgcccggaaagggggcaaaagattcaagctgaagtttttagcagctgctgtt
ttagggaaagaaattcagaacacgggcgaattgggtcacgatcccaccgaagacgcccaa
tgcgcccttgagctggcccagtatttcattgaacaaggatccaggaaagtaggtgcctta
gctctttttacgactgttgttttaaggacaggaatggatgtgtctttttaccctgacacg
gtcctaacagtgaggacaattgaccagtggaacagaagttgcctccagaaatggtga
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