Thamnophis sirtalis (common garter snake): 106554295
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Entry
106554295 CDS
T06107
Symbol
EPCAM
Name
(RefSeq) epithelial cell adhesion molecule
KO
K06737
epithelial cell adhesion molecule
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106554295 (EPCAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106554295 (EPCAM)
04090 CD molecules [BR:
tsr04090
]
106554295 (EPCAM)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
106554295 (EPCAM)
Exosomal proteins of colorectal cancer cells
106554295 (EPCAM)
CD molecules [BR:
tsr04090
]
Proteins
106554295 (EPCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPCAM-Trop-2_C
EpCAM_N
Thyroglobulin_1
Trp_oprn_chp
Phage_holin_3_6
EphA2_TM
DAG1
Saf_2TM
DUF4381
PMP1_2
Motif
Other DBs
NCBI-GeneID:
106554295
NCBI-ProteinID:
XP_013928420
UniProt:
A0A6I9YXT0
LinkDB
All DBs
Position
Unknown
AA seq
302 aa
AA seq
DB search
MGFPPMAVFLLGALLALAATAWSQEGCSCDMNKRTNCSIVADGACQCKSIGLDITVNCQT
LTSKCLLMKAEVTGLKSGRSQRPEHAHADNDGIYDPECDAKGNFKAKQCNGTKTCWCVNS
AGVRRTEKSDKNITCEEVVRTSWIIIEAKYDTNKDEASLESTIGKNFKELYFLDEKHIKV
KYEKPFISVHLKQNASEKRNTDVDIADVAYYFEKDVKGDSVVNSNIERNPLRFENTIIYY
VDEKRPEFTMKRLTPGIIAVIVVVVLAIVAGILVLIFTRRKRGKYEKAEVKEMNEIQRGL
NS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgggatttccgcctatggctgttttccttctgggagcgcttttggcgctcgccgctacg
gcgtggagccaagaaggatgctcatgtgacatgaacaaacggacaaattgttctatagtt
gctgatggtgcatgccagtgtaaatcaattggacttgatatcacagtgaactgtcagaca
ctgacttcaaaatgcctattgatgaaagcagaagtgactggcttaaaatcaggtagaagt
caaagaccagaacatgcacatgcagacaatgatggcatatatgatccagaatgtgatgca
aagggcaatttcaaagcgaaacagtgcaatggaacaaagacttgctggtgtgtgaacagt
gctggagtacgaagaactgaaaagagtgataaaaatattacatgcgaagaagtagtaagg
acaagctggattattattgaagcaaagtatgacactaataaagatgaagcttctcttgaa
agtactattggaaaaaacttcaaggaactttactttttggatgaaaaacacataaaggtt
aaatatgagaaacctttcattagtgtccatctcaaacaaaatgcttcagaaaaaagaaat
actgatgtggatatagctgatgtagcatattattttgagaaagatgtcaaaggagattcg
gttgtcaattcaaatattgaaagaaatccccttcgatttgagaacacaattatatattat
gttgatgaaaaaagaccagagtttacaatgaaacgtttgactcctggaattattgctgta
attgtggttgtagtcctggcaatagtggctggtattcttgtactgatatttacccgaaga
aagaggggcaagtatgaaaaagctgaggtaaaggaaatgaatgaaatacagagaggacta
aactcgtaa
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