Thamnophis sirtalis (common garter snake): 106554439
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Entry
106554439 CDS
T06107
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
tsr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106554439 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106554439 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106554439 (NUP153)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106554439 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
DUF535
Motif
Other DBs
NCBI-GeneID:
106554439
NCBI-ProteinID:
XP_013928573
UniProt:
A0A6I9YVD5
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MDPGESGVGAGGGKIRTRRYHLAAASSKPYPRNKQGIMNIVKESIKNIVPTWLQRYFTQN
EETSPNEQRNLEGDINYHPPFADDITENALEIDGRITPEPTRITLGEPSTSRSSLNFTDI
LTRPSLHRSHVNCNILDSPSPFSQPSTSTAFPVNNSRLSLGKEMKDSTSQHEDDNISTTS
GFSSRASDKDITVSKNASVPPLWSAESERSVSLPQHSANSSKKPGFNLSAFGALSPSLGN
ASFLKASQLGNSPFYPGKTTYGGAAATTRQSKLRITPYQTPLRRQMKAKQASAQSYGVTS
STARRILQSLEKLSSPLADAKRIPSSVSTSLSSPLENSMLNVTNFHSSRKRVETHYPPVQ
KLVTPKPVSRSMTHSQFFKPSLVSSAESSRVRQRLEINHKAGQEKRLTMELQSEQSKSVT
SPTFTTSTANGLPPAMGSGGGKMRKGRGIHYVPKSTENEEMEIPALPDISLPISTSSLPT
FSFSPLASSSGSSLTPSAAQPVTNKVQPASSPVFKFSSPIVKSTEAEMLPPVSIGGFKFS
APVAKSSELSVSRNTSLSPQINSAINSISNKKENEYDGPFKPAKVLKEGSVLDILKSPDF
ASPTSLSTSSSSVRPYVETSTEVYTRPAISNFSGAVSGLGDPMKQMPTNWPHDTSLTQNK
LAENKCTPCQITKVPTPSGTKQTEILTQNITIKSVSSTEAQGFGYKFKAGVGTWDCDTCL
VQNKSEAAKCVACETPKPGTGVKQALVLPFVTDNATTTVSSSSSSTNVTNTLGFGDKFKK
PKGAWECSVCLVSNLEENNQCVACQSDKPGSSVPVASGSASSLPTLSGGFLNLDKFKKPE
GSWDCETCLVQNKADATKCIACESSKPGHKAELKGFNTATSEPSGPSFKFGIQSSPSSSS
ELSQTAGKNFKFGEQTGFKFGTTSDMGSSGGFKFSKNEGSNPGSFSSESKSEESVKEGKN
TTTFSFGLPAGASSSSSASFQFGIANLGQQEKKDGPNKPVIGGFTFGTSSIGATTASDKK
TGISTFKFGNLQEKEIAESPFSSKKSEEKKETPSAKGGFTFGNIDPVNAPPRTLGRTDEK
QEVGASSTPLVFGKKAESEESKAQSMFSFGKAEQTKDGTVKPAFNFGLAKPTEKPAEQQI
KTTFAFGAQASSADPAPSKEAFTFLSSTSNTPVPSVSLGGGSGGGGGSSSTIFSSTPSSS
APPPAFLFGQANNTVSNSAFGNASDSNTAQSFGFAQDSKPPTTTSSTSTPVPFLFGSVAP
TNITANTGFSFSAPTTTAPPTGSASSFVFGSGSSVSTAGPAFGASQTPAFGQSQASNQTS
TPSFGSLSSSSLFPASSLPAPPAFGTVSNSAQPSVFGQQANQPPGFGSGAAPSTGQVFQF
GSSTANFNFSSSNPGIFTFGASSTAPAQPTGSSGFPFSQASSFNLGRNNGKSAFSTGSSV
PGRKIKTAVRRRK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggggaaagcggagtcggcgcgggcggcgggaagatccggacgcggcggtat
catctggcagcggcctcctcgaagccttacccgaggaacaagcagggaattatgaatatt
gtgaaggaatccataaaaaacattgttccaacttggcttcaaagatattttacacaaaat
gaagagacatctccaaatgagcaaagaaatctggagggggatataaactaccatcctccc
tttgcagatgatatcactgaaaatgctcttgagatagatggtcgaatcactcctgagcca
accagaattactttaggagagccatcaacaagtagatctagtttaaatttcacagatatt
ttaacacgtccctctcttcatcggagtcatgttaactgcaacattttggattccccgtca
ccattctctcaaccatccacatcaactgcatttccagttaataattctcgactttcactt
ggaaaagaaatgaaagattctacctcgcagcatgaagacgataacatctcaactacaagt
ggcttctcttcaagggcatctgataaagacataactgtttcaaaaaatgcttcagtgcca
cctttatggtctgcagagagtgaaagatccgtctcccttcctcaacattcagcaaatagt
tctaaaaaacctggatttaatctgtctgcctttggagcactttctccttcacttggtaat
gcatcatttcttaaggcaagccagctagggaattctccattttatcctggcaaaactaca
tatggtggtgcagctgcaacaacaaggcagtctaaattacgaattactccatatcagaca
ccattaagacgacaaatgaaagccaagcaagcgagtgcacaatcctatggagtgacaagt
tccactgcaaggcgcatcttgcagtctttggagaagttatcaagtccattagcagatgct
aaaagaattccttcttctgtttctacttctttgtcatctcctttggaaaacagtatgctg
aatgttaccaatttccattcatcaaggaaaagagttgaaactcattatccaccagttcag
aagcttgtgacacccaagcctgtttcacggtcaatgactcattcacagttttttaaacct
tctctcgtgtcttctgctgaatcaagcagggtacgacagagactagagatcaaccataaa
gcagggcaggaaaaaaggctcacaatggaattgcaaagtgaacagtcaaaaagtgtcaca
agccctacattcacgacttctacagctaatggactaccacctgcaatgggaagtggtgga
ggcaaaatgagaaagggaagaggtatacactatgtaccaaaatccacagaaaatgaggag
atggagataccagcactaccggacatttctctgcccattagtacatcatcactgccaaca
ttcagctttagccctctggctagttcttctggttcatcattaactcccagtgctgcccaa
ccagtgactaacaaggtacagccagctagcagtcctgtattcaaattttcatctccaatt
gtaaaatctactgaagcagaaatgctgcctccagtatctattggtggatttaaatttagt
gctcctgttgcaaaatcatctgaactttcagtatccaggaatacttcattatcaccccaa
attaattcagctatcaacagcataagcaataagaaagaaaatgagtatgatggtcctttt
aagcctgcaaaagtcctaaaagaagggagtgttctggatattttaaaaagtcctgatttt
gcttccccaacgagtctatcaacatcctcatcatcagtcagaccatatgttgaaacaagt
acagaagtttacacaaggcctgcaataagtaatttttctggagctgtttcaggacttgga
gatcctatgaagcaaatgccaacgaattggccacatgacacctctcttacacagaacaag
ttggcagaaaacaaatgtacaccctgtcaaattacaaaagtgccaacacccagtggtact
aaacagactgagattttgactcagaacatcaccatcaaatcagtttcttcaacagaagca
caggggtttggatataagtttaaggcaggagttggaacttgggactgtgatacctgtttg
gtccagaacaaatcagaagccgctaaatgtgtggcctgtgaaacaccaaaacctggaaca
ggagtaaaacaagctctggtgttgccttttgtcacagacaatgcaaccacaacagtgtct
tcctcttctagttctactaatgttacaaacactttaggatttggagacaaattcaaaaag
ccgaaaggtgcttgggagtgttctgtgtgcttagtgtcaaatctggaagagaacaaccag
tgcgtggcctgtcaatcagacaaaccagggagttcagtacctgtagccagtggcagtgct
tcatctttacctactctttctggaggatttttgaatttagacaaattcaagaaaccagag
ggaagctgggactgtgaaacctgcttagtacaaaacaaagcagatgcaactaaatgtata
gcttgtgagagttcaaaaccaggccacaaggctgaattgaaaggttttaatacagctact
tcagagccatctggtccttcatttaaatttggtattcagtcatcaccatcatcatcatca
gaattatcccagactgcaggaaaaaacttcaaatttggagaacaaacaggattcaaattt
ggtactacatcagatatgggttcttcaggaggctttaaattttctaaaaatgaaggctcc
aatccaggaagcttttcctcagagtctaaatctgaggaaagcgtgaaagaaggaaagaac
accaccactttcagttttggacttcctgctggagctagcagttcatcatctgcatcgttt
caatttggaatagctaaccttgggcaacaagagaagaaagatggacctaacaagccagtt
ataggaggtttcacttttggcacaagttctataggagccacaactgcatctgataaaaaa
actggaataagtactttcaaatttggaaatttacaggagaaggaaattgcagaaagtccc
ttttcctctaagaaatcagaggagaaaaaggaaacaccttcagcaaaaggtggctttact
tttggtaatatagaccctgtgaatgccccaccacgtactttgggaaggacagatgaaaag
caggaggtgggtgcctcttctactccactagtgtttggaaagaaagcagaaagcgaagag
tcaaaggcacaatccatgttttcatttgggaaggcagaacaaaccaaagatggcacagta
aaacctgcgtttaatttcggcttggcaaaacctactgagaaaccagctgaacaacaaata
aaaacaacatttgcatttggggcacaagcaagctctgcagatccagcaccatcaaaggag
gctttcaccttcctgagctctacttctaatactcctgtgccaagtgtttctcttggtggc
ggcagtggtggcggcggcggcagcagcagcacgatatttagcagcaccccttcttcctca
gctcccccaccggcctttctatttggacaggccaacaacactgtgagcaattcagctttt
ggcaatgcttctgattcaaataccgcacagtcttttgggttcgctcaagacagcaagcca
ccaacaaccacttccagtacaagcactcctgttccattcctgtttggttcagtcgccccc
actaacatcacagctaacactggcttcagtttctcagcacctaccacaacggcacctcct
acaggttccgcttcttcctttgtgtttggctctggatcttcggtttctacagctggtcca
gcttttggtgctagccagacaccagcgtttggtcaaagccaagcctccaatcagaccagt
actccatcctttggatcactttcctcatcttccttgtttcctgctagctctctgcctgct
cctccagcttttgggactgtttcaaatagtgcccagccgtctgtctttggacaacaagct
aaccaaccacctggttttggttcaggtgcagctcccagtactggtcaagtattccagttt
ggaagtagtactgctaatttcaacttttcaagcagcaatccaggaatatttacctttggt
gcaagttcaactgcaccagcacagccaacaggttcttcgggatttccattttctcaggct
tcatcatttaatttgggcaggaataacgggaaaagtgcattctccacgggatcttcagtg
cctggtcggaagataaagacggctgttagacgtagaaaataa
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integrated database retrieval system
