Thamnophis sirtalis (common garter snake): 106554448
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Entry
106554448 CDS
T06107
Symbol
GIGYF2
Name
(RefSeq) PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106554448 (GIGYF2)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106554448 (GIGYF2)
Surveillance factors
Other surveillance factors
106554448 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
106554448
NCBI-ProteinID:
XP_013928585
UniProt:
A0A6I9YYD1
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MHRSQSWEERGDRRFEKTGRKEPVRPNFEEAGTATVGRKHEFIRSESENWRIFREEQNGE
EDDGGWRLAGSRRDGERWRPHSPDGPRSAGWREHLERRRRFEFDFRDRDDERGYRRVRCG
SGSMEDDRDNLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFHPIEEREDQ
SDSEENHNEEAKELDKTLLREGVTTDRIIAEETEKESSPCTRSGTSPKSQSQEPLPTSCV
ERKEDCIPVATEKSEFEESQMENIPLSKVPNREDSPSTVQSLPQIPSEAVSTIPSSDSSP
NSALRCVQASVMAAPGMGNALTDPDDEEGLKHLEQQAEKMVAYLQDSALDDERLAAKLQE
QRGKGTSIPLHHESMQKWFYKDPQGEIQGPFSNQEMTEWFQAGYFTMSLLVKRACDDSFQ
PLGDIMKIWGRVPFTPGPASPLHMGELDQERLTRQQEFTAMYQMQHLQYQQFLLQQQYAQ
VMAQHQKAAVSSQQQQQLALLLQQFQALKMRKVEQNMVPPVTRSMSDTSSIWELQSTAPQ
TTVWEGSSVWDLPIDTAAQGPALEQLQQLEKAKVAKLEQERREAELRAKREEEERKRQEE
LRRQQEELIRRQEEERKRREEEELARRKQEEALRQQREQEIALRRQREEEERQQQEEALR
RLEERRREEEERRQREELLRKQEEEAAKWAREEEAKRQVEENRLRMEEEAAQQRQEEEER
KRKELELQRQKEIMRLRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSSSRACQSQA
TLSLAEIQKLEEEREKQLREEQRRQQRELVKALQQQQQQQQQKLSGWGNVAKSAGTTKSL
LEIQQEEARQMQKQQHQQQQPQQQHHHQQPQQQQPQSRPRSTTQHSNRHTSIGNSVWGSL
STNPSSQWASDLVSSIWSNADTKNSNMGFWDDAIKEVGPRNATNKNKNNASISKSIDVTS
RHNKKVEEEEKLLKLFQGVNKPQDGFTQWCEQMLHALNSANNLDVPTFVSFLKEVESPYE
VHDYIRAYLGDTPEAKEFAKQFLERRAKQKANQQRQQQDSVWGMNHSSLHTVFQTNQSNN
QQSSFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcataggtcacagagctgggaggaaagaggagacagaaggtttgaaaaaacaggcaga
aaagaaccagtgagaccaaattttgaagaagctggaactgcaacagtaggaaggaaacat
gaatttatacgctctgaaagtgaaaattggcgcattttcagagaagaacaaaatggtgaa
gaagatgatggaggttggcgacttgctggttcgagaagggacggtgagaggtggcgacct
catagtccagacggccctcgttctgcaggctggagagagcatttggaacgacggcgaaga
tttgaatttgattttcgagaccgagatgatgaaaggggttaccgaagagtacgatgtggc
agtggcagtatggaggatgatagggataaccttcctgaatggtgcttagaagatgctgag
gaggaaatggggacttttgactcatctggggcattcctgtccttaaaaaaagtgcaaaag
gaaccaattcctgaggaacaggaaatggatttccatcctatagaggaaagggaagatcag
tcagattcagaagaaaatcataatgaagaagccaaagaattagataagacccttttgaga
gaaggagttacgacagaccgaataatagcagaagaaacagaaaaagaatcttcaccatgc
accaggtcaggtacctcaccaaaatcacagtcacaagagccattaccaacaagctgtgtt
gaaaggaaggaagactgtattccggtagcaacagaaaaatcagaatttgaagaaagccaa
atggagaatattccactatccaaagtgcccaatagagaagactctccttctactgtccag
tctttgccacaaattccttcagaagcagtttccactatcccttcttcagattctagtcca
aattcggccttaaggtgtgttcaagcatcagttatggctgctcctggtatgggaaatgct
cttactgaccctgatgatgaagagggcctcaaacatttagaacagcaagcagaaaaaatg
gtggcatatttgcaagatagtgccttggatgatgaaagattagcagccaaacttcaagag
cagagaggaaagggtacgtcaataccactacaccatgagtccatgcaaaaatggttctac
aaagatcctcaaggagaaattcagggtccattcagtaatcaggagatgacagagtggttc
caagctggatactttacaatgtcgttattggtgaaaagagcatgtgatgacagcttccag
ccccttggagacatcatgaaaatatggggcagggtccctttcactccagggccagcatca
cctctgcatatgggtgagttggaccaagaacgtctgactagacaacaggaatttacggcc
atgtatcaaatgcagcatctccagtaccagcaatttttgttacaacaacaatatgcacag
gtgatggcacaacatcaaaaagcagctgtctcatctcagcagcagcagcagctggctctc
cttttgcaacaattccaggcacttaaaatgagaaaagttgaacagaacatggtgccacct
gtaacaagatctatgtcagacactagttcaatttgggaacttcaatcaactgctccacaa
actactgtctgggaaggaagtagtgtctgggatctcccaatcgatactgcagctcaggga
ccagctttagaacagttacagcagcttgaaaaggccaaagttgcaaagctagagcaggaa
cggagggaagctgaattaagggccaaaagagaagaagaagagcgtaagaggcaggaggag
ctccggaggcaacaggaagaactaattaggagacaagaggaagaaagaaaaagaagagaa
gaagaagagttagctcgtaggaagcaggaggaagctctcaggcaacaacgggaacaagaa
attgcactaaggaggcagcgagaggaagaggaacggcaacaacaggaagaagcacttaga
aggttggaagaaaggagaagagaagaagaggaaagacggcagcgagaagagttgcttcgg
aaacaggaagaggaggctgccaaatgggcacgtgaagaagaggccaagcgtcaggtagaa
gaaaaccgactgcgcatggaagaagaagcagctcagcagcggcaagaagaggaagaacgg
aagcggaaagagctggaactccaacgccagaaggaaattatgaggctgaggcagcagcaa
caggaagctttgcgtcgattgcagcagcaacagcagcagcagcaactcgcgcagatgaag
ctcccttcttcttcaacatggggtcagcaatccagttcaagagcttgtcagtcacaagca
acattatcattagcagaaatccaaaagcttgaagaagagagagagaaacaacttcgagaa
gagcaaaggcgtcaacagcgtgaactagtgaaagctctccagcagcagcagcagcaacag
caacagaagctgtctggttggggaaatgttgccaagtctgccggcactacaaaatctctc
ttggagatacagcaggaagaggcaaggcagatgcagaagcagcaacaccagcagcagcag
ccgcagcagcaacaccaccaccagcagccgcagcagcagcagccgcagagcagaccccgc
agcactacacaacattcaaatcggcataccagcattggcaattcggtatggggctcttta
agcacaaatcctagcagccagtgggcatcagatcttgtcagtagtatttggagtaatgct
gatacaaaaaattcaaacatgggattctgggatgatgcaatcaaagaagtgggccctcgt
aatgcaactaataaaaacaagaacaatgctagcatcagtaaatctatagatgttacaagc
aggcataacaagaaggtagaagaagaagaaaagttattgaaattgtttcagggagttaat
aaacctcaggatggattcactcagtggtgtgaacaaatgcttcatgcactcaactcagct
aacaacttggatgttcccacatttgtttctttcctgaaagaagtggaatctccttatgag
gttcatgattacatcagagcttatcttggggacacccctgaagccaaggaatttgccaag
cagtttcttgagcgccgtgccaaacaaaaagccaaccaacaacggcagcagcaggattct
gtatgggggatgaaccatagttctttgcatactgtctttcaaactaatcagagcaacaat
cagcagtccagttttgaagcagtgcagagtggcaaaaagaagaagaaacaaaaaatggtt
cgcgcagatccaagcttgttaggtttctcagtcaatgcttcatcagaacggctcaatatg
ggagaaatagagactttggatgactactga
DBGET
integrated database retrieval system
