Thamnophis sirtalis (common garter snake): 106554500
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Entry
106554500 CDS
T06107
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106554500
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
Contactins
106554500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Ig_6
V-set_CD47
Sp38
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
106554500
NCBI-ProteinID:
XP_013928662
UniProt:
A0A6I9YWI9
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MRLSWELLVLQSFMLCLADDNILHGPVFIQEPSSVIFALDSEEKKVKLNCEVKGNPKPTI
RWKLNGTIVDIGMDYRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELIYAWIFNEYPTFVHQDNRRFVSQETGN
LYIAKVEKSDVGNYTCVVTNTVTNTRVRGPPTPLILRNDGVMGEYEPKIEVQFPETVPSA
KGTTVRLECFALGNPVPTISWRRTDGKQIPKKARRHKSSSILEIPNFQQEDAGMYECVAE
NVRGKNVARGQLTFYAPPNWNQKISDIQVAIEESIYWECKANGRPKPSYNWLKDGELLLP
QERLHIEHGTLTIPSVNLSDTGMYQCVAENRYGVIYVSAELSVIAVGPDFSKTFLKKITF
VKVGSDATIECKPKASPRPTFTWKKGKEIIKESERHTLLEDGTLKIANVTKADAGSYTCI
ATNHFGVASSTGNLIVKDPTRFVVAPTSMDVTAGESILLPCQVSHDHPLDIVFTWSFNGR
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLNHAGKYVCMVQTSVDKLSAAADLIVRGPPG
PPEAVTIDEITDTTAQVSWRPGADNRSPITTYVIQARTPFSVGWQGVNTVPDVIDGNTFT
ATVVGLNPWVEYEFRIVAASLIGIGEPSKPSEKRRTEEALPEVTPANVSGGGGTKSELVI
TWETVPEELQNGGGFGYVVAFRPVGTISWMQTVVVSPDASKYVFRNESLPPFSPYEVKVG
VYNNKGEGPFSFITVVYSADEEPTRAPTNVFAKSLSASDIEVFWSLLPETQSKGRIQGYE
VRYWKHGDKEEQAGRMKTMTNQTFAKITNLKSSALYHLAVKAYNTAGMGPSSAIVNVTTK
KPPPSQPPGNIIWNSSDSKIILNWDQVKAQNNESEVKGYKVFYRWNRQNSMSIIETNKTS
VELSLPFDEDYIIKICI
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgtcatgggaactgctcgtactgcaatcgttcatgttgtgccttgcagatgat
aacatactgcatggaccagtttttatccaggaaccaagcagcgtgatttttgcacttgac
tctgaagaaaaaaaagttaaactgaactgcgaagtaaaaggaaatcctaagccaactata
aggtggaagttaaatggaaccattgttgacattggtatggattaccgctacagtgtggtt
gaaggaagcttgttgatcaataatcccaataaaactcaagatgctggaacataccagtgc
atagcaacaaattcattcggaacaattgttagccgagaagcgaaactgcaatttgcttat
cttgaaaatttcaaaaccaggacgaggagtacagtttcagtccgacaaggacagggaatg
gtgttgctttgtggacctccaccacattccggagaattaatctatgcctggattttcaat
gaatatccaacttttgtgcaccaggataatcgtcgctttgtttcgcaagagactgggaat
ttatacatagctaaagtagagaaatcggatgtgggaaattatacatgtgtcgtgacaaac
acagtaacaaataccagagtgcgagggcctcctacgcctttaatcttgagaaatgatgga
gtgatgggagaatatgagccaaaaatcgaagtgcaattcccagaaacggttccatctgcc
aaaggaacaactgtgaggctggagtgttttgcattgggaaacccagttcctacaatcagc
tggagaagaacagacggaaagcaaatccctaaaaaagctcggagacacaaatcaagcagc
attctcgaaatccccaactttcagcaggaagatgctggcatgtacgaatgcgtagctgaa
aatgtgagaggaaagaacgtggccagaggccaactaacattttatgctcctcccaactgg
aatcagaaaataagtgatattcaggtggctatagaagaaagtatctactgggaatgtaag
gcaaatggcagaccgaagccttcttacaactggctgaaggatggtgaacttcttctccct
caggaaagacttcacatagaacatgggacacttaccattcccagcgtgaatctctctgac
actggcatgtatcagtgtgtggcagaaaatagatatggagtcatctatgtcagcgcagaa
ctgagcgtaattgctgtgggtccagatttctccaaaaccttcttaaaaaaaataactttt
gttaaagttggtagtgatgcaaccattgaatgtaagcctaaagcttcgccaaggccaact
tttacttggaagaaaggaaaagagatcataaaggaaagtgagaggcatactcttttggaa
gatggaactctaaaaattgccaatgttaccaaagcagatgctgggagttatacatgtata
gcaacaaatcattttggcgtagccagcagcactgggaacctgatagtaaaagatccaaca
cgatttgtggtggcacctaccagcatggatgtcactgctggtgaaagtatacttctgcct
tgccaagtatctcatgatcatccactagacattgtctttacttggtcatttaatggacgt
ctgatagactttgaaaaagatggagatcactttgaaagagttggagggcaggattcagct
ggtgatttgatgatcagaagcatccagctgaatcatgctggaaaatacgtctgcatggtg
caaacaagcgtggacaaactatcagctgctgcagacctgattgtaagaggtcccccaggt
cctcctgaagctgtgacaattgatgagataacagacactacagctcaggtttcttggaga
ccaggagcagataatcgcagtcccattacaacatacgttattcaagcaagaactccattt
tctgttggatggcaaggagtaaatacagtgcctgatgtcattgatggaaatacatttaca
gcaacggtagtaggcttaaacccatgggtggaatatgaattccgaatagtagctgccagc
cttattggaattggggagccaagcaagccatcagagaaacgaagaacggaagaggctctt
cctgaagtcactccagccaatgtcagtggaggtggtggcactaaatctgaattggttata
acatgggagacagtgccagaagagttacagaatggaggaggttttggctatgttgttgcc
ttccgaccagttggtacaataagctggatgcagactgtagtggtttcaccagatgcctcc
aaatatgtgtttcggaatgagagtttacctccattttcaccgtacgaagttaaagttgga
gtgtacaacaacaaaggagaaggtcctttcagctttatcacggttgtttattcagccgat
gaagaacccaccagagctcccaccaatgtctttgccaaaagtctttctgcttcagatata
gaagtcttttggtctttgctgccagagacccagagcaaaggaaggatacagggctacgag
gttagatattggaaacatggagataaagaagagcaggctggaagaatgaaaactatgacc
aatcagacttttgcaaaaatcaccaacttgaagagcagtgctttgtatcatttggctgtc
aaagcttacaacacagcagggatgggaccatccagtgccatagtcaatgtgacaaccaaa
aagccacctccaagtcagcctcctggaaacattatatggaattcatcagactctaagatt
atactgaactgggatcaagttaaagcacaaaataatgaatctgaagtgaaaggatacaaa
gtgttctatagatggaatagacaaaacagtatgtctattatagagacaaacaaaacatct
gtcgagctttcattaccctttgatgaagattatatcataaaaatatgcatataa
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