Thamnophis sirtalis (common garter snake): 106554553
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Entry
106554553 CDS
T06107
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106554553 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106554553 (RNF43)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106554553 (RNF43)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106554553 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
106554553
NCBI-ProteinID:
XP_013928729
UniProt:
A0A6I9YXG9
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MSVGPQLQLAVLWPWLLMAMLQIRLGYSGLALVAAMEAERTLAQKAIIRVIPFKLEPLTL
EGVFASIAEITPAEGKLLQFHPLSLCNTSEDEHTVPGFVSIVKLERPERDLRPCLSLANK
AKLAGERGARAVLFDITDDQSAADQLRKPQELSHPVVLVWGHNAELLMRVVNNNREAHVK
IEVKEMPAWPDYDVWILLTVVSTVLVIVVIFFVRTRCQPSRNQTNVQETTMQAINRLAIR
RYQTPHRYAPTADSASTCSSPPICAICLEEFCEGQELRIITCSHEFHRQCVDPWLQQHQT
CPLCMFNIVDRIPPTLPRQSREDRHNSGSRQRPHLFRQRPGRALYHISRTVPHTPSRNCS
LVGSRGHPFFHSPELSQLDLGTMHYLPYRPIGFEPWCGHQAPPSRSLLRSQHPLEPPVCE
PALPSHRLCLLQHQPSCQGLRAPLAAQISHAVPLHRGIRHGRHHHHHSSGSGESYLTEPS
GYLPDGPGSDSSSGPCHGSSSDSMLNCTDVSLQAIHGSCSTFHSSLSSDYDPFTFCGSEK
LTTESKQDSSSSGKDSQLQSVDSMVTSRAQLASNHVHYHHHHHRHHHYGQKPSSCPSGRP
NQESNPRKMKYSRTKVGSQNISLPKRTEKMQMVDLSRQRHTELYLADGSDISMTASSQAG
TVGLWGTQKPHAQIHPGRRRWKCPFETSPEDSSTTLECRIASHPGGFSRNQGPPEIQPLL
IGGPPAHNFAALPEISKCLTPCFTMENQEKRDMLGQLDCEHTFPEECSDLDATRSNTSSY
LINRVPQNLQGSTEDIPNVYEHSV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttggcccccagctacagctggcagtcctctggccttggctgctaatggctatg
ctgcagatacggctaggctactcaggactggcactggtggcagcaatggaagctgagcgg
actttggcccagaaggcaataattcgggtaattcctttcaagctggaacccctcacactg
gaaggagtctttgctagcattgcagagatcacccctgctgaaggcaaactgttgcagttc
caccccctgtctttgtgtaataccagcgaggatgaacatactgttccaggatttgtctcc
attgtcaaactggaaaggcctgagcgggatctccggccatgcctgtcattggccaataag
gcaaaactagccggggagaggggagctcgggctgtactttttgacattacagatgaccag
agtgctgctgaccagttgaggaagcctcaagagctgagtcatcctgttgttctggtctgg
ggccacaatgctgaacttctcatgagagtggtgaacaataaccgtgaagcccatgtgaag
attgaggtgaaggaaatgccagcttggccagattatgatgtttggatactgctcaccgtt
gtgagtaccgtactggtcattgttgtaatcttcttcgttcgcactcgttgtcagccaagc
agaaatcagacgaatgtgcaggaaacgaccatgcaagcaatcaaccggctggccatacgg
aggtatcaaaccccccatcggtatgcgccaacggcggactctgctagcacctgcagttct
cctcccatatgtgcaatctgtttggaagaattttgcgaggggcaggaactacggatcatc
acctgttcccacgagttccatcggcagtgtgtggacccttggctccagcagcaccaaaca
tgtccattgtgcatgttcaacattgttgatcggatcccccctactttacctaggcaatct
cgtgaggaccggcacaattctggatctagacagaggcctcatttattccggcaacgaccg
gggcgtgccttgtaccacatctcacgaactgtccctcatacgccctccaggaactgctct
ttagtgggctcccgtggacaccctttcttccactctcctgaactctcccagttggatctt
ggaactatgcattacttgccctataggccaattggctttgagccttggtgtggccaccaa
gcgcctcccagcagaagcctgttacgttctcagcatcccctggagcccccagtgtgtgag
ccagccctgccctctcataggctgtgtctgcttcagcaccagccctcttgccaaggtctc
agggctccccttgcagcccagataagtcatgctgttcctttacatcgaggaattcgccac
gggaggcatcaccaccaccacagtagtggctctggggagagttaccttacagaacccagt
ggataccttcctgatggccccggtagtgactccagttcaggtccttgccacggcagctcc
agtgactccatgttgaattgcactgacgtcagtcttcaggctatccatggcagttgctct
acttttcacagctccctgagcagtgattacgatccgttcaccttctgtggctcagagaag
ctgaccacggaaagcaaacaagactcttcttcatctgggaaggactcacagcttcagtcg
gtagactccatggtaacaagtagagcacaactagccagtaatcatgtccactatcaccac
catcaccacaggcatcaccattatgggcagaaaccttccagctgtccaagtggcagacca
aaccaagagtctaatccacgcaagatgaaatattccaggacaaaggtgggatcacaaaac
atctcactaccaaaaaggacagagaaaatgcaaatggtagatctttctaggcaaagacac
acggaactgtatttggcagacgggtctgacattagcatgacagccagtagccaagctgga
actgttggactgtggggcactcagaaaccccatgcacaaatccatccaggtagaaggaga
tggaagtgtccttttgagacgtcacctgaggattccagcacaaccctggaatgcagaatt
gctagccatcctggtggtttttctagaaaccagggtcccccagaaattcaacctctttta
atagggggtccccctgcacataattttgcagcattgccagagatatcaaaatgcctaact
ccatgttttaccatggagaaccaggaaaagagggacatgctgggacaattggattgtgaa
cacacatttccagaagaatgttcagacttggatgcaacaagaagcaacacaagctcttac
ctcattaatagagttccgcaaaatcttcagggatctacagaagatatccccaatgtgtat
gaacattcagtttga
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integrated database retrieval system
