Thamnophis sirtalis (common garter snake): 106554592
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Entry
106554592 CDS
T06107
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106554592 (SOX21)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106554592 (SOX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106554592
NCBI-ProteinID:
XP_013928780
UniProt:
A0A6I9YYX7
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MAKPADHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVVSYGLSDVGDPHVHPLGPHHPALK
AGALHGHEALLSNPEKAAAAAAAARVFFPPSAAAAAAAAAAAAAGSPYSLLDLGSKMAEI
SSSAGSGGGSAAGLPYAASSLAYPTAGGAFHAAAAAAAAAAANGGHSHSHPSPGNPGYMI
PCNCSGWPSPGLQPPLAYILLPGMGKPQLDPYPAAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccggcggaccacgtgaagcggcccatgaacgccttcatggtctggtcgcgg
gcgcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatctccaag
cggctgggcgccgagtggaagctgctgagcgaggccgagaagcggcccttcatcgacgag
gccaagcgcctgcgggccatgcacatgaaggagcatccggactacaagtaccggccgcgg
aggaaacccaagacgctcctcaagaaggacaagttcgccttcccggtggtctcctacggc
ttgtccgacgtcggcgacccccacgtccaccccctcgggccgcatcacccggcgctcaaa
gccggcgccctccacggccacgaagccctcctgtccaacccggagaaagccgccgctgcc
gctgcggctgcccgcgtcttctttcctccctccgctgcggcggctgcagcggcggccgca
gccgcggctgcgggcagcccttactcgctgctcgacctgggctcaaagatggcagagatc
tcgtcctcggcgggctccggcggcggttcagcggctggactgccctacgccgcctcctcg
ctggcttacccgacggctggaggcgctttccatgccgccgcagctgcagcggccgccgcc
gcggccaacggaggccacagtcattcgcacccgtcccccggcaaccccggctacatgatc
ccctgcaactgcagcggctggcccagcccgggactccagccgcccctggcctacatcctg
ctgcctggcatgggcaaacctcaactggacccttacccggcggcggcctacgccgcggcc
ctatga
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