Thamnophis sirtalis (common garter snake): 106554661
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Entry
106554661 CDS
T06107
Symbol
FMR1
Name
(RefSeq) fragile X mental retardation protein 1
KO
K15516
fragile X mental retardation protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106554661 (FMR1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106554661 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
106554661 (FMR1)
mRNA cycle factors
Stress granule specific factors
106554661 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
106554661
NCBI-ProteinID:
XP_013928855
UniProt:
A0A6I9YZ42
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MEGLPVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPTGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLDVPEDLRQMCAKESAHKDFKKAVGAFSVTNDPEAHQLIILSINEVTTKR
ANMLIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRPDKEKVYMADDGPGLGRGGRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSLAPAEEERDSYLRRGDGRRRGGGARGQGGRGR
GGFKGNEDQSRTDNRQRNSRDAKGRTDGSLQIRIDCNNERSVHTKTLQNTSSEASRLRTG
KDRNQKKEKPDSGESQQPLVNGVP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagggcctgcccgtggaagtgcggggctccaacggggccttctacaaggcatttgtg
aaagatgtccatgaagattcaataactgttgcttttgagaataactggcagccagagaga
cagattccattccacgatgtcaggttccctccacctacagggtacaataaagatataaat
gaaagtgatgaagttgaggtttattccagggctaacgaaaaggaaccatgttgctggtgg
ctggctaaagtgagaatgataaagggtgagttttatgtaatagaatatgctgcttgtgat
gctacctacaatgaaattgtcacaattgagcgtttgagatctgtcaatcctaacaaacct
gcaaccaaggatacatttcataagattaagcttgatgtacctgaagatttaaggcagatg
tgtgctaaagaatctgcacacaaagatttcaaaaaggcagttggggcattttctgtaaca
aatgatcctgaggcccatcaacttatcattttgtctattaatgaagtaacaacaaaacgt
gcaaatatgttaattgatatgcactttcgaagtcttcgaaccaaattatccttgataatg
agaaatgaagaagcaagcaaacaactggagagctcaaggcagctcgcttcaagatttcac
gagcagtttgttgtacgtgaagatctgatgggcctggcaattggcactcacggagctaac
atccagcaagcccggaaggtaccaggggtgacagcaattgatcttgatgaagacacttgt
acattccatatttatggggaggatcaagatgcagtgaagaaggccagaagttaccttgag
tttgctgaggatgtcatccaggtcccaagaaacttagtaggaaaggttataggaaaaaat
ggaaaactcattcaagagatagtggataaatctggagttgtgagagtgcgaattgaggct
gaaaatgataaaaatattccacaggaagagggaatggtcccgtttgtcttcgtgggaacc
aaggacagtatcacaaacgccaccgttcttttggattaccacctcaattatttaaaggaa
gtggatcagctccgcctggagaggttgcagattgacgaacagcttcgacagatcggggcc
acatcaaggccaccccctaatcgccctgataaagagaaggtgtacatggctgacgacggt
cccggtctcggaaggggcggccggccttacaggaaccgaggccacagcaggcgtggccca
ggctatgcttcaggcactaactctgaagcatccaatgcttctgaaacagagtctgatcac
agggacgagcttagcgactggtccttagccccagcggaagaagagcgggacagctacctg
cgcagaggggatgggcgaaggcgcggaggaggcgcgcgtggccaaggcggaagaggccgg
ggagggttcaaaggaaacgaggaccagtcaaggacagacaaccgtcagcgcaattcaaga
gatgctaaagggagaacagatggctcactccagatcagaattgactgcaataatgaaagg
agtgtccacactaaaaccttacagaatacctccagcgaagctagccggctgcggacgggt
aaggaccgtaaccagaagaaagagaaaccggacagcggagaaagtcagcaaccgttggtg
aatggcgtgccctaa
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