Thamnophis sirtalis (common garter snake): 106554662
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Entry
106554662 CDS
T06107
Symbol
PVRL1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03266
Virion - Herpesvirus
tsr04514
Cell adhesion molecules
tsr04520
Adherens junction
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
106554662 (PVRL1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106554662 (PVRL1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106554662 (PVRL1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106554662 (PVRL1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106554662 (PVRL1)
04090 CD molecules [BR:
tsr04090
]
106554662 (PVRL1)
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
Nectin family
106554662 (PVRL1)
CD molecules [BR:
tsr04090
]
Proteins
106554662 (PVRL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
ig
Ig_2
I-set
Syndecan
Protocadherin
Motif
Other DBs
NCBI-GeneID:
106554662
NCBI-ProteinID:
XP_013928856
UniProt:
A0A6I9YY42
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAGPRQQLSWLRSWWTTGVCLATLGFPGLWAQKVLVNETVSGFIGTNVVLHCNLDKINHT
RITQVTWQKASNGSKQNVAIFNPNMGVSILPPYEERVVFQNPSRTDGTIKLSNLQLDDEG
IYICEFATFPTGNLENQLNLTVLAKPVNRMEGTTKPLIARAGMTEKILVATCTSSNGKPP
STVTWETKLKGEAEFREIRNENGTITVISRYRLLPSREAHQQQLKCVVNYQLERFTESMT
LNVLYEPEVRIDGFDSNWYLNRKDVKLTCVSDANPPATEYQWKRLNASLPDSAEIQNSTL
FFKGPVSYSLSATYICEATNTIGTRSGQVEVNVTEFPYTPSPPGTSVAHPTVPTAVIGGV
VGGASLVVVVAVVVLMVLRHRRHTFKGDYSTKKHVYGNGYSKAGVPQHHPPMAQNLQYPD
DSDDEKKPGPLGSNSYEDEDDDGAGAERKHRSCPNKYEEDSKRPYFTVDEGEARSEAYNE
RTLGFQYDPEQLDIADNMVSQNDGSFISKKEWYV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccggaccaaggcagcagctgagctggctccggagctggtggactactggcgtgtgt
ttggcgaccctgggcttcccaggcctctgggctcagaaggtgcttgtcaacgagacggtc
tccggcttcatcggcaccaacgtggtccttcattgcaacttggacaagatcaaccacacg
aggatcactcaggtcacctggcagaaagccagcaatggctccaagcaaaatgtggccatc
ttcaaccccaacatgggtgtctccatcctgcccccctacgaggagagagtggtcttccag
aacccttccagaaccgatgggaccatcaagctgtccaacctccagttggacgacgaaggg
atctacatctgcgagtttgccaccttcccgaccggcaacctggaaaaccaactcaatctc
accgtcttggccaaaccagtgaatcggatggagggcaccaccaaaccactgatcgccagg
gccggcatgaccgagaaaatcctggtggccacctgcacctcctccaatgggaagcctccc
agcactgtgacctgggagactaagctgaaaggcgaggcggaattccgggagatccgcaat
gagaatggcaccatcactgtgatcagccgctaccgccttctaccaagccgggaggcccac
caacagcagctgaagtgcgtggtcaactaccagttggagcgttttacggagagcatgacc
ctcaacgtgctgtacgaacccgaggttagaatcgatggttttgacagcaactggtacctc
aaccggaaggatgtgaaactaacctgcgtatccgacgccaatcctcccgccaccgagtac
caatggaagcggctgaatgcctcgttgccggacagcgccgaaattcaaaacagcactctg
ttctttaaaggaccggtctcatacagcctatcggcaacgtatatctgcgaagccaccaac
accatcggcacccgatccgggcaggtggaagtgaatgtcacagaattcccctacaccccg
tctccaccgggcacatccgtggcacatccgactgtccccaccgccgtgattgggggcgtg
gtgggcggagcctcgttggtcgtagtggtggccgtggtcgtccttatggtgctccgtcac
cggcgacacactttcaagggcgactacagcaccaagaagcacgtctacggcaacgggtac
agcaaggcgggcgtccctcagcatcacccacccatggcccagaaccttcagtatcctgac
gattcggacgacgagaagaagcccggccctctgggcagcaacagctatgaagacgaagac
gacgatggcgccggggccgaacggaagcaccggtcctgtcccaacaagtacgaggaggac
tccaagcggccttacttcacggtggatgagggcgaagcccgttctgaagcctacaatgaa
cggacacttggattccagtatgaccccgagcaactagacatagccgataacatggtctct
cagaatgacgggtcttttatttccaaaaaagagtggtatgtgtag
DBGET
integrated database retrieval system
