Thamnophis sirtalis (common garter snake): 106554714
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Entry
106554714 CDS
T06107
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106554714
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106554714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
DUF4812
Motif
Other DBs
NCBI-GeneID:
106554714
NCBI-ProteinID:
XP_013928915
UniProt:
A0A6I9YZ96
LinkDB
All DBs
Position
Unknown
AA seq
2439 aa
AA seq
DB search
MSQVSGPNAQLLKSDDYLPSIELQSQQKKKKKKNNHIVAEGPSKGFGKEGFPGGLDNQDS
TRKGLEGSQEEKKKKKKPKVKKDPKDLKEPKEKKEPKEPKTPKNPKIPKEPKEKKVKHTT
PKPKTSKKASNKKAESESSAVKKKVNKGKEGSENSDVEKTPLGSPHPEEEDDAGIQKRRS
SRQVKRKRYTEDLEFKISDEEVDDADAAGRNSPSNNSQSEQQESSDAEGPVVEKILSSRI
IKKQMENGEETLSEEFYVKYKNFSYLHCQWASVELLDKDRRIQQKIKRFKAKQVQNKFLS
EIDDELFNPDYVEVDRIMDISHSKDDSGEPVIHYLVKWCSLPYEDSTWELKKDIDQAKIE
EYEKLVAREPETERVERPPADDWKKSECSREYKNNNKLREYQLEGVNWLLFNWYNTRNCI
LADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQ
ASRRMIQTYEMYFKDPQGRAIKGSYRFHAIITTFEMILTDCPELRNIPWRCVIIDEAHRL
KNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLK
TEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS
KGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNPDSPDFQLQAMIQAAG
KLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAID
RFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK
IYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKKAELDIEALNGRNNLVIDTPRIRKQTRLYSAVKEDELMEFSDLESDAEEKPSIK
LRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILLHGRYKRQLTEQDVETICRTILVYC
LNHYKGDENIKSFVWDLITPTADGQTRALVNHSGLSAPVPRGRKGKKVKAQSSQPVLQNA
DWLTSCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQEVIGDQADKILEGSDSSEID
IWIPEPFHAEVPMDWWDKEADKSLLIGVFKHGYEKYNSMRADSTLCFLERVGMPDAKAIA
AEQRGTDLLTDGGDGGDFDREDEDPEYKPTRIPFKDEIDEFANSPSDKEESLELLHAGKH
SDNTADFGQLYWPSTSTLTTRLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRAL
EAEREAIITEKRQKWTRREEADFYRVVSTFGVIFDPIKQQFDWNQFRAFARLDKKSDESL
EKYFSCFVAMCRRVCRMPAKPDEEPPDLSTMIEPITEERASRTLYRIELLRKVREQVLHH
PLLAERLKLCQPSLDLPEWWECGKHDKDLLIGAAKHGVSRTDYHILNDPELSFLDSHKNF
AQNRGGGNLTTISLLNPLGVCCGQSMSIVPTSLVQDEKLTEQAEVKVEGAEKVPAIEKSG
NEEEEIEGADVAVKSDKEEEAEVKVVPVKCEIKDTELSTEVDPKSISEKGSEDDEEEKLD
DDDKSEESSQPEGMISRNKNFDEESNASLSTARDETRDGFYMEDGDPSVAQLLHERTFAF
SFWPKDRVMINRLDSICEAVLKGKWPVNRRQMFDFQGLIPGYTPAAVDNTLQKRSFAELS
MVGQASISGSEDVSVSPQLSKEDVLNLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQL
RESKIVSENGQEKIVDLSKASREATSSTSTFSAVPSKFLLPTVSTPVSDVFKSQMELLQA
GLSRTPTRHLLNGSLIDVEPPMKRRRGRRKNVEGLDLLFISGKQASLTAEDAEVTKVFDE
EMEPPPARNIPSPGQLDPDTHIPVINMEDGTRLVGEEAPKNKDLIEWLKLHPMYTLDMPS
YVPKSADVLFSPFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMK
DLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVREEGASRRGRRPKSEIAK
AAAAAAAVASTSGINPLIMNSLFAGMDLASLQNLQNLQSLQLAGLMGFSPGLATPAAAAG
GDSKNPAAILPLMLPGMAGLPNMFGLGGLLNNPITAASGNTTMASSQGESEDGTSNEEEK
KNENEEENKDSEKSTDIVSATDSANGSVGATAAMASATTTSNTGLPANPLTFNPFLLSTM
APGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSSEVKVTDKTEEAAFKDEENLEGSDA
EGSLDKTANSSALEDEIAQGEELDSLDGGDEIENNENDE
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggttagtggaccgaatgcccagctcttgaaaagtgatgattaccttccctca
attgagctgcaatcacagcaaaagaaaaagaaaaagaaaaacaatcatattgttgcagaa
ggtcccagcaaaggatttggaaaggaaggctttcctggtggccttgacaaccaggattct
actagaaaaggcctagaaggctcccaggaagaaaaaaagaaaaagaagaaacctaaggtg
aaaaaggatccgaaggatttgaaggaacccaaggagaagaaggagcctaaggaacccaag
acacccaaaaaccccaaaatccccaaagagccaaaggagaagaaagtaaaacatactaca
ccaaaacccaagaccagcaaaaaagcaagtaacaagaaagcagaatcggaatctagtgca
gtgaagaaaaaggtcaacaagggaaaggaaggttctgaaaactcagatgtggaaaaaaca
ccactaggatcaccacatcctgaagaggaagatgatgcaggaattcagaagaggcgttct
agcaggcaagttaaaagaaagcgttatacagaagacttggaattcaagatttctgatgaa
gaagttgatgatgcagatgctgcgggaagaaactccccttcaaataattctcagtccgag
caacaggaatcttctgatgctgaaggtcctgtagtagaaaaaattttgagtagccgcata
atcaagaaacagatggagaatggagaagaaacactatcagaagaattctatgtaaaatac
aaaaacttctcttacctccattgtcaatgggcctctgtggaactactggacaaagacagg
agaattcaacagaagattaaaagatttaaagcaaagcaggttcaaaataagttcctttca
gagatagatgatgaactttttaatccagattatgttgaagttgaccgaataatggatatt
tcacacagcaaagacgatagtggagagcccgtgattcattatttggtgaaatggtgttca
cttccatatgaagacagcacatgggaattaaagaaagacatagatcaagctaagattgag
gaatatgagaaactagtggctagggagccagaaacagaacgtgtggagcgacctcctgct
gatgactggaagaaatcagaatgttccagagaatataaaaacaacaacaaactcagggaa
taccagttggaaggagtaaactggcttcttttcaactggtacaacacacgcaactgcatt
ttagcagatgaaatgggattgggaaaaactatccagtccattacatttctctatgagata
tatttaaaaggaatccatggtccatttttggttattgccccattgtctacaatccccaat
tgggaaagagaattccgtacctggacagagttgaacgttgttgtgtatcatgggagccaa
gccagtcgaaggatgattcagacatatgaaatgtacttcaaagacccacagggtcgtgca
attaaaggatcatacagatttcatgccatcattacaacatttgaaatgattttgactgat
tgtcctgagctccgtaacattccatggcgatgtgtgatcattgatgaagctcacaggctg
aagaacagaaattgtaagctgctagaagggctcaaaatgatggacctggaacacaaggtg
cttctaacagggactcctttgcaaaatactgtagaagagctttttagcttgctccatttc
ttggaaccaagtcgttttccttcagaaaccactttcatgcaagaattcggtgatctaaaa
actgaggaacaggttcagaaacttcaagcaattttaaaaccaatgatgttgagacgactg
aaagaagatgtggagaagaacctggcacccaaggaagaaactattattgaagttgaattg
acaaacattcagaaaaaatactacagagctattcttgaaaagaatttcgcatttttgtca
aaaggaggtggtcaagcaaatgtccctaatctgttaaacactatgatggaactgagaaaa
tgttgcaaccatccataccttataaatggtgctgaagagaaaattttggaagagtttaaa
gaaacacacaatcctgactctccagattttcagctccaggcaatgatccaggctgctggc
aagctagtactgattgacaagttgctgccaaaattgaaggctggtggccacagagtgctt
atcttttcccagatggtgcgctgcttggacatactggaagactacctcattcaaagacga
tatccttatgaacgaatagatggcagagtaagaggcaaccttcgtcaagcagctattgat
aggttttccagacctgattctgacagatttgtttttctactatgcacaagagcaggtggc
ttggggattaatcttacagctgctgatacctgcattatttttgattcagattggaatcct
cagaatgatcttcaggctcaagctcgatgccacaggataggacagagcaaatctgtgaag
atctacagattaataacaaggaattcttatgaaagggaaatgtttgacaaagcaagctta
aaacttggtcttgataaagctgtgcttcaatccatgagcggaagagagaatgctacaaat
ggggttcagcagctctccaaaaaggaaatagaggatcttttgaggaaaggagcttatggt
gctttaatggatgaagaagatgaaggatccaaattttgtgaagaggatatagatcaaatt
cttctgagacgaacacacacaatcacaattgagtctgagggaaaaggctccacatttgca
aaggctagttttgttgcatctggtaacagaacagatatttctttagatgatcctaatttc
tggcagaaatgggcaaaaaaagctgagcttgatattgaagccttaaatggaaggaacaat
ctagttattgatactccaagaataagaaagcaaactagattatacagtgcagtcaaagaa
gatgaactgatggaattttcagaccttgaaagtgatgctgaagaaaaacctagcataaaa
cttcgtaggccacaggacaaatcccagggatatgcaaggagtgaatgctttagagtagaa
aaaaatctgttagtctatggttggggacgatggactgatatccttttacatggacgttat
aagcgccagctaactgagcaagatgtggaaactatttgccgaactatccttgtatattgt
ctcaatcattataaaggggatgagaatatcaaaagttttgtctgggatttgattactcca
acggcagatggacaaactcgggccttagttaatcattctggcttgtctgctccagtgccc
cgggggagaaaaggcaaaaaagtaaaagctcagagttcacaaccagtgcttcagaatgct
gactggctaaccagctgtaatccagatgccttgtttcaggaggacagctataagaaacat
ctcaaacatcactgtaataaggtcctgctgcgtgtccgcatgctgtactatctgaggcaa
gaagttataggggaccaagctgacaagatcttagagggttctgattcaagtgagattgat
atttggattcctgaaccatttcatgcagaagttcctatggattggtgggataaagaggca
gataaatctcttttaattggagtattcaaacatggctatgagaagtacaattctatgaga
gcagactctactctatgttttttggaaagggttggcatgcctgatgccaaggccattgct
gctgagcagagagggacagatctattaacagatggtggtgatggaggtgattttgataga
gaagatgaagacccagaatataaaccaaccagaattccattcaaggatgaaattgatgaa
tttgcaaactcaccttctgacaaggaagaatctctagagctcctccatgcaggcaagcac
agtgacaatactgctgattttggtcaactctactggccaagcacttcaaccctgactact
cggttgcgccgtctcattactgcatatcaacgtagttataaaaggcaacaaatgaggcaa
gaagcactaatgaagactgaccggcgtcgacgacgacctcgtgaagaagtgagagcactg
gaagcagaaagagaagctataataacagaaaaacgtcaaaagtggacaagaagagaggaa
gcagatttttatcgtgttgtatctacttttggagttatttttgaccctataaagcaacag
tttgattggaaccagttcagagcttttgccagacttgataagaaatctgatgaaagtttg
gagaagtacttcagttgttttgtagctatgtgcaggcgcgtgtgtcgaatgccagccaaa
ccagatgaagaacctcctgatctttctactatgattgagcctatcactgaagaacgtgct
tctagaactttatatcgtatagaactcttgagaaaagtccgagagcaggttctccatcat
ccactattggcagagaggctaaaattgtgtcagccaagtttggatttaccagaatggtgg
gagtgtggcaaacacgataaagatttattgattggagctgctaaacatggagtcagcagg
acagattatcacattctaaatgatcctgaactttcttttcttgattctcataaaaatttt
gctcaaaatagaggtggtggtaatctaactaccatatctctattaaatccactgggtgtt
tgctgtggtcagtcaatgtctattgtcccaacctcactagtacaagatgaaaaacttaca
gaacaagctgaggttaaagtggaaggagctgaaaaagtaccagccatagaaaagtctggc
aatgaggaggaggagatagagggagcagatgttgcagtaaaaagtgataaggaggaggag
gctgaggttaaggttgttcctgtaaaatgtgaaataaaagatacagaactgagtacagaa
gttgatcctaaatcaatttccgaaaaaggttcggaagatgatgaagaagaaaaacttgat
gatgatgacaagtcagaagaatcttcacaacctgaaggaatgatttctcggaataagaat
tttgatgaagaaagcaatgcatccctgagcactgcaagggatgaaacgcgtgatggattt
tatatggaagatggagacccatccgtagcccagctgcttcatgaaagaacatttgctttt
tctttttggcctaaggatcgagtaatgatcaaccgattagacagcatctgtgaagcagtg
ctgaagggaaagtggccagtaaatagacgccagatgtttgatttccaggggcttatacca
gggtatacgccagcagctgtggacaatactctacagaaaagaagctttgctgaactctcc
atggttggtcaggccagcatcagtggcagtgaagatgtctctgtatcgcctcaattatct
aaggaagatgtactcaatttatcagttccacgtcagcggaggaggcggaggaggaagatt
gaaattgaggctgaaagggcagccaagaggagaaatttaatggaaatggttgcccaattg
cgagaatcaaagattgtctctgaaaatgggcaagaaaaaattgtagacttatcaaaagcc
tcaagggaggcaacaagttctacctcaactttttcagctgttccttcaaagtttctgtta
cctactgtttcgacaccagtgtctgatgtctttaaaagtcaaatggagctgctacaagca
ggcctttctcgcacacccacaagacatctgctaaatggttccttaattgatgtcgagcca
cccatgaaaaggagaagaggaagaaggaaaaacgtggaaggtcttgatcttttatttata
agcggcaagcaagcctctctaacagcagaagatgcagaagtgaccaaagtgtttgatgaa
gaaatggaacctcctccagcaagaaacattccatctcctgggcaactggatcctgatact
catattcctgtcattaatatggaagatgggaccagactagtaggagaagaggcacctaaa
aacaaggatttaattgaatggcttaaattgcatcccatgtatactcttgatatgccaagt
tatgtaccaaagagtgcagatgtgctgttttccccatttcaaaaaccgaagcaaaaacgg
cacagatgtcgaaatcctaataaattggatattaacaccttaactggagaagagagggtt
cctgttgtaaataaacggaatgggaagaagatgggtggtgctatggccccaccaatgaaa
gacttgccaagatggctggaagaaaatccagaatttgctgttgctccagattggactgac
attgttaagcagtctggttttgttccagaatccatgtttgaccgtcttctcacaggtcct
gtggtgcgggaagaaggtgcaagcagaagagggagaaggccaaaaagtgaaattgccaaa
gcagctgcagctgctgctgctgtagcttcaacatcgggaattaacccactgataatgaac
agtctgttcgctggaatggatctcgcaagccttcagaatttacaaaacctacaatctctt
cagcttgcaggtctcatgggcttctctccaggactggcgacacctgctgctgctgctgga
ggtgattctaaaaatccagctgctattctgcctctgatgttgccaggtatggcagggttg
cccaatatgtttggactaggtggattgttgaataacccaataacagctgcttctggaaac
accactatggcttccagtcaaggagaaagtgaagatggcacttcaaatgaagaagaaaaa
aagaacgagaatgaagaggagaacaaagactctgagaaaagcacagacattgtttcagct
actgactctgcaaatggatctgttggtgcaactgctgctatggcctctgctaccaccaca
agcaacactggattgcctgccaaccctctaactttcaatcctttccttctgtcaacaatg
gcccctggtctgttttacccttctatgtttctacctccgggattgggaggattgacacta
cctggtttcccagcattagcgggacttcagaatgcagtgggctccagtgaagtgaaggtt
acagataaaaccgaagaagctgcctttaaagatgaagaaaatctagagggcagtgatgca
gaggggagccttgataaaactgcaaattcctctgctttagaagatgaaatagcacagggt
gaagaattagactcacttgatgggggggatgaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
