Thamnophis sirtalis (common garter snake): 106554726
Help
Entry
106554726 CDS
T06107
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04810
Regulation of actin cytoskeleton
tsr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106554726
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106554726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106554726
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106554726
Factors involved in mRNA localization
Other mRNA localization factors
106554726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
Cypovirus_WIV_4
BP28CT
LRIF1
Motif
Other DBs
NCBI-GeneID:
106554726
NCBI-ProteinID:
XP_013928932
UniProt:
A0A6I9YXA8
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MLLKVMGFGLYLMDGSVSNIYKLDAKKRINLTKIDKFFKQLQVVPLFGDMQIELARYIKT
SAHYEENKSRWTCTSSGSSPQYNICEQMIQIRDDHMRFISELARYSNNEVVTGSGRQEAQ
KTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPTDKYSNKDCPDNAEEYERATRY
NYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTIYAALQDFAQITLREPLRQAIK
KKKNVIQSILQAIRKTVCDWEGGREPFNDPALRGEKDPKSGFDVKVPRRAVGPSSTQLYM
VRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESFFYTHLINFSETLQQCCDLSQL
WFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYNDSAHYALTK
FKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLLDKRLRSECKNQGATIPLL
TSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAVYKSMELAIGRFESEDLTSIVELDGL
VEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGST
NRFVRTILPFSQEFQRDKQPNAQPQYLHGSKALNLAYSSIYSNYRDFVGPPHFKVICRLL
GYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLK
DIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNILPRIHVKEGE
RLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIR
IFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLHWAG
CMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVPLKKMVERIRKFQILNDEIITT
LDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcttctaaaagtgatgggttttggtttatacctgatggatggaagcgtcagtaacatc
tataaattagatgccaaaaagaggataaatctcacaaagattgacaagttttttaagcag
ctgcaagtagttccactgtttggtgacatgcagattgaactggcaagatacattaaaact
agcgctcattatgaggagaataaatctagatggacatgtacttcttctggcagtagtccc
caatacaacatctgtgagcaaatgatccagataagagatgatcacatgcgttttatttca
gaactggctcgttacagcaataatgaggtggttactggatcaggacgtcaagaagctcag
aaaacagatgctgagtatcggaaactttttgatctttctcttcagggtctccaacttcta
tcacagtggagtgcacatgttatggaagtgtattcatggaagttagtacacccgactgac
aaatattctaacaaagattgccctgacaatgctgaggagtatgaaagagcaactcgctat
aattatacaagtgaagaaaaatttgctcttgtagaggtcattgcaatgattaaaggatta
caggtgttgatggggagaatggaaagtgtcttcaatcatgccattcgtcatacaatctat
gctgctctccaagactttgcccaaatcacacttagagaaccattaagacaagccatcaaa
aagaagaagaacgtcatccaaagtattctacaggctatcagaaagactgtgtgtgactgg
gaaggtgggcgcgaaccatttaatgaccctgcactaaggggagagaaagatcccaaaagt
ggctttgatgttaaagttccaaggcgtgctgtaggtccctccagtacccagctttacatg
gtgagaaccatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttgaga
agtagccttgaggggcccaccatattggacattgaaaaattccatcgagagtctttcttc
tacactcacttgataaatttcagtgaaaccctccagcagtgctgtgatttgtcccaactt
tggttccgggaattttttctggagttgaccatgggtcgccgaattcagttccccattgag
atgtctatgccttggattctaactgaccacatattggagaccaaggaagcatcaatgatg
gaatatgttctatattctttggacctgtataatgacagtgctcattatgcactcaccaaa
ttcaagaaacaatttctctatgatgaaattgaggcagaggtcaacttatgttttgatcag
tttgtctacaagttggcagatcagatatttgcatattacaaggttatggcaggaagcctt
cttctggataaacgattaagatcagaatgtaagaatcagggtgcaacaattccattgcta
acatctaatcgatatgaaacattgctaaaacagagacatgtccagcttcttggtcggtca
attgatctgaatcgcttgatcacacagagaatttcagcagctgtgtacaaatcaatggaa
ctggcaattgggcgttttgaaagtgaagatttgacctccattgtagagttggatggatta
gtagaaataaacaagatgacacacaagctcctgagcagatatatgactttagacagcttt
gatgctatgttcagagaagccaatcataatgtatctgctccctatggaagaatcactctt
cacgtcttttgggaactcaactatgattttcttcccaattattgctacaatgggtcaacc
aacaggtttgttcgaacaatactaccattttctcaggaattccagagagacaagcagccc
aatgcacagcctcaatatctacatggatcgaaggctttgaatctggcatactccagcatt
tatagcaactatagggactttgtaggcccccctcatttcaaagtgatttgcagactactg
ggatatcaagggattgctgtggtgatggaagaattactgaaagttgtcaagagtctgtta
caaggcacaattcttcagtatgtaaagaccttaatggaagtaatgcccaaaatctgtagg
ttgcctagacatgagtatggctccccaggaattctggaattctttcatcatcagctcaag
gatattgttgagtatgctgaactgaaaactgtgtgtttccaaaatctgagagaagtggga
aatgctattctcttctgtctcctcattgagcagagcctgtcattggaggaagtttgtgat
ctattgcatgcagcaccattccagaatattttaccaagaattcatgtcaaggagggggaa
agacttgatgctaaaatgaagagactagaatcaaaatatgctccactccaccttgttcca
ttgattgaaagactgggaacacctcagcaaattgccattgcaagagaaggagatttgcta
accaaggagcgtctctgctgtggactttctatgtttgaagtcatcttaacaaggattcga
atattcctggatgatcccatatggcgtggtcctctccctagcaatggtgtgatgcatgta
gatgagtgtgtggaatttcaccgcctttggagtgcaatgcagtttgtatactgtattcca
gtaggaacccatgaatttactgtcgaacaatgttttggagatgggctgcattgggctggc
tgtatgattattgtgctcttgggacagcagcgtcgatttgatgtgctcgatttttgttat
cacttactgaaagtacagaagcatgatggcaaagatgaagtcatcaagaatgtgccatta
aaaaaaatggttgagagaattcgcaaattccagatcctgaatgatgaaattattaccaca
ctggacaagtatttgaaatctggtgatggagaaagcacaccggtggaacatgtccgctgt
ttccaacctcccattcatcagtctttggccagcaactag
DBGET
integrated database retrieval system
