Thamnophis sirtalis (common garter snake): 106554929
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Entry
106554929 CDS
T06107
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04137
Mitophagy - animal
tsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106554929
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106554929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106554929
03009 Ribosome biogenesis [BR:
tsr03009
]
106554929
04131 Membrane trafficking [BR:
tsr04131
]
106554929
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106554929
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106554929
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106554929
Membrane trafficking [BR:
tsr04131
]
SNARE
SNARE associated proteins
Others
106554929
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106554929
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106554929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
AAA_33
AAA_2
TIP49
RNA_helicase
AAA_28
NPHP3_N
AAA_14
Vps4_C
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
ATPase_2
AAA_18
ATPase
IstB_IS21
AAA_7
ABC_tran
DUF815
AAA_24
ResIII
TsaE
Sigma54_activat
Viral_helicase1
NB-ARC
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
106554929
NCBI-ProteinID:
XP_013929152
UniProt:
A0A6I9YXX4
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MPASGGDPKGEDYSTAILRQKHRPNRLIVDEAANEDNSILSLSQAKMEELHLFRGDTVLM
KGKKRRETVCIVLTDDSCQNEKIRMNRVTRNNLRVRLGDVVSVQACPDVKYGKRIHVLPI
DDTIEGLTGNLFEVYLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVEVDPSPHCIVAPD
TIIHCEGEPIKREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDPALRR
FGRFDREIDIGIPDSVGRLEILQIHTKNMKLADDVDLEKVGNETHGHVGADLAALCSEAA
LQAIRKKMSVIDLEDDTIDADILNAMAVTMDDFQWALGQSNPSALRETVVEVPQVSWDDI
GGLQEVKRELQELVQFPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
VSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDGGGAADR
VINQILTEMDGMTNKKTVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILQA
NLRKSPVAKDVELNYLAKITHGFSGADLTEICQRACKLAIREAIEMEIKAERERQRQKCA
AMDDDYDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPAGKQT
TGGDGSSGSNSGQGSLFQEEGEDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctcgggcggggaccccaagggagaggattactccacagctatcctgcgccaa
aagcatcgtcctaatcgcctcattgtagatgaagcggccaatgaagacaacagtattttg
agtctgtcccaggccaaaatggaagaactgcacttgttccgtggagacacggtgctaatg
aagggaaagaaacgcagggagacagtatgtatcgttcttactgatgactcttgccagaat
gagaagattcgaatgaaccgcgtcacccgtaacaacctccgtgtgcgccttggagatgtg
gtcagtgtacaggcctgcccggatgtgaagtatggaaagaggattcatgtactccccatc
gatgacactattgaagggttgactgggaacctctttgaagtttacctcaaaccatacttt
ctggaagcctatcgtcctgtacataaaggtgatatcttccttgtacgtggtggaatgcgg
gctgtggaatttaaggtggtggaagtagatcccagtccccactgcattgttgctcctgac
acaattatccattgtgagggggagcccatcaaacgagaggatgaagaggagagcctcaat
gatgttggctatgatgacatcgggggctgccgtaaacagttggctcagatcaaagagatg
gtggaactgccattgagacacccagcgctctttaaagcgattggagtgaagcctccaaga
gggattcttctttatggaccccctggaactggaaaaacactcgtagcccgggcagttgca
aatgaaactggagcattttttttccttatcaatggcccagagatcatgagcaagctggct
ggggaatctgaaagcaacttacgcaaagcctttgaagaggctgaaaagaacgctccagct
attatctttattgatgagctagatgctattgctcccaagagggagaagacacatggggaa
gtggaacgccggattgtttcccaactcctgaccctcatggatggcctgaaacaacggtct
catgtcatagttatggctgccactaaccgaccgaacagtattgatcctgctttgcgtcga
tttgggcgctttgatcgagaaattgacattggaattccagattcagtgggaagactagaa
atcttacagatacataccaagaacatgaaactggctgatgatgtggacctggagaaggtg
ggcaatgagacccatggtcatgtgggtgctgatctggcagcattgtgttccgaggcagca
ctccaagcaatccgtaagaagatgagtgtcattgacctggaggacgatacaattgatgct
gacatccttaatgctatggctgtcaccatggatgatttccagtgggctcttggccagagc
aacccctctgccctgcgggagaccgtagtggaagtgccgcaggtctcttgggacgacatt
gggggtttgcaggaagtaaaacgtgagctacaagaactggtgcagttcccagtggagtat
ccggacaagttcctgaagtttggaatgacaccttcacgaggtgtgctgttctatgggccc
cctggctgtggcaaaaccctcctggcaaaggccattgcaaacgaatgccaggccaatttt
gtctccatcaagggtcctgagctactcaccatgtggtttggagagagtgaggccaacgtc
cgcgatgtttttgacaaggcccgccaggctgctccctgcatcctgttttttgatgagctg
gattccattgccaagtcccgaggtggcggagcaggggatggtggaggtgcagctgaccgg
gtcatcaaccaaatccttacagaaatggatggcatgaccaacaagaagacagtatttatt
ataggtgccaccaatagaccagatatcattgacccagccatccttcgtccaggacgtctg
gaccagctcatctacatcccgctacctgatgaaaagtctcgcgtagcgatcctccaagcc
aacttgcgaaaatcaccagttgccaaggatgtcgagttgaattatctagctaagatcaca
catggcttctctggtgctgacctcaccgaaatctgtcagcgtgcctgcaagcttgccatc
cgtgaggctatcgagatggagatcaaggcagaacgggaacgccagcgtcagaagtgcgct
gccatggatgatgattatgacccagtgccagagatccggcgggatcactttgaagaagca
atgcgctttgcacgccgttcggttagcgataatgatatacgcaaatacgagatgtttgct
cagacgttacagcagagtcgtggctttggcaacttcaggtttccagcaggcaagcagacc
actggtggagatggcagcagtggcagcaacagcgggcaaggaagcctcttccaggaggag
ggggaagatgacctctataactga
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integrated database retrieval system
