Thamnophis sirtalis (common garter snake): 106554990
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Entry
106554990 CDS
T06107
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106554990 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106554990 (VPS35)
Membrane trafficking [BR:
tsr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
106554990 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
106554990
NCBI-ProteinID:
XP_013929226
UniProt:
A0A6I9YZC3
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MPTTSQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLS
PKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYV
KSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQIDEETTGDISDS
MDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYK
QIVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNANVKNII
IALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAM
KCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELMRLLKIPVDTYNNVLTVLKLK
HFHPLFEYFDYESRKTMSCYVLSNVLDYNTEIISQDQVDAIMNLVSTLIQDQPDQPAEDP
DPEDMADEQGLVGRFIHLLRSDDPNQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQL
AFRYKENEKVDDKWEKKCQKIFTFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENH
ETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFGEENHEPLRTQCALAASK
LLKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQL
FIEILNRYIYFYEKENETVTIQVLNQLIQKIREDLPNLESTEETEQINKHFQNTLEHLRL
RRESPESEGPIYEGLVI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgccaactactagccagcagtctccgcaagatgagcaagagaagcttctggatgaggcc
atacaggctgttaaggtgcagtctttccaaatgaagcgctgcttggacaaaaacaagcta
atggatgccctgaaacatgcctcgaacatgcttggtgagctgaggacttcaatgttgtct
ccaaagagttattatgaattgtatatggccatctctgatgagctccactacctggaggtg
tacttgacggatgagtttgctaagggaaggaaggtggctgatctgtatgagctggttcag
tacgctggaaacatcatcccacggctctatttactaataactgttggggtggtctacgtg
aagtctttccctcaatctcgaaaggacatcttaaaagacttggtggaaatgtgtcgtggg
gtccagcatcctttaagaggcctgttccttcgcaactatcttcttcaatgcacccggaac
attttgcctgatgatggagagcagatagacgaagaaaccaccggggacatcagtgactcc
atggactttgtgctgttgaactttgctgagatgaataagctctgggtgcgaatgcagcac
caagggcacagtcgagatcgggagaagagggagcgtgagaggcaggagctgaggatcctg
gtgggaaccaacttggtccggctcagccagctggaaggcgtcaacgtagagagatacaaa
cagattgtcttacctggcatattggaacaagtagttaactgcagggatgcgctagctcaa
gaatacctaatggaatgcatcatacaggttttcccagatgaatttcacctccagactttg
aatcctttccttcgagcgtgtgcggaattacaccaaaatgcgaatgtcaaaaatattata
attgcattaattgacagacttgcactctttgcccaccgagaggatggaccagggatccca
gcggatattaaactcttcgacattttctcccagcaggtggctacagtcatacagtctagg
caagatatgccttcggaggacgtggtgtcattacaagtctcgctcattaacttggccatg
aagtgctacccagaccgcgtggactatgtggacaaagtgctggagacaacagtggagatt
ttcaacaagcttaacctggagcacattgcaaccagcagcgcagtttccaaggagctgatg
agactcttgaagatccctgttgatacctacaacaacgtcctcactgtcctgaaactgaag
catttccatcctttgttcgagtacttcgactatgagtccagaaagaccatgagttgttac
gtgcttagcaacgtgctggattacaacacagaaattatctcccaagaccaggtagatgcc
atcatgaatctggtttcaacgctaattcaggaccagccagaccagccggcagaagatcca
gaccctgaagacatggctgacgaacagggtcttgtaggcaggtttatccacctgcttcgt
tcagacgatcccaatcagcagtatctgattttaaataccgcgcggaagcacttcggtgct
ggtgggaaccagcgcatccgttacacgttgccgccattggtgtttgctgcgtatcaactc
gcatttcgctataaggagaatgagaaagtggatgacaaatgggaaaagaaatgccagaag
atcttcacttttgctcaccagaccatcagcgctttgattaaagccgagctggcggaactt
cctctccgtctcttccttcagggagctttagccgctggagaaattggctttgagaaccat
gaaactgtggcctatgaattcatgtctcaggcattttctctctatgaagatgaaatcagt
gattcaaaagcccagctggctgcaatcacgctgataattgggacatttgagcggatgaag
tgctttggcgaggagaaccacgaacctttgagaactcagtgcgcactggcggcttcaaaa
ttgctgaagaagccagatcagtgccgagccgtgagcacctgcgcccatcttttctggtct
ggccggaacacagacaagaatggagaagagctccatggaggcaagagggtcatggaatgc
ttgaaaaaggcgctgaagatagccaaccaatgcatggatccctccctgcaagtgcagctc
ttcatagaaattttaaacagatatatctacttttatgaaaaagagaacgagacggtgaca
attcaggtgttgaatcagctcattcaaaaaatccgggaagaccttcctaatctcgaatcg
accgaggagacagaacagatcaacaaacattttcagaacacactggagcatttgcgtttg
aggagggaatcccccgaatctgaggggccaatttatgaagggctggtcatttaa
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integrated database retrieval system
