Thamnophis sirtalis (common garter snake): 106555096
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Entry
106555096 CDS
T06107
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106555096
04091 Lectins [BR:
tsr04091
]
106555096
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106555096
Lectins [BR:
tsr04091
]
C-Type lectins
Others
106555096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
REJ
GPS
Ion_trans
PLAT
Pox_M2
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
106555096
NCBI-ProteinID:
XP_013929346
UniProt:
A0A6I9YZP5
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MLRVSMREDAKSVLYKWYLDHSFKKKSNLLPPGCNLNGFPQSSLSFLQNDTEVLVLNSSF
LQSHGKAFQIKATAVSENKYGEETYIVSSVPPPVAPECSVSPPQGSVFNSFSISCQSSCL
LGQCPPIESSSFMYCFYLESNSLLHCGQDPALPLVYLPLGEEDNDFVLQIKISVANNYGH
AVYSNATVRVQPEDINSGNQTLQAMVLEKSNSILKGENNSMSLFQLYKSVTSVLNQGRKE
ATFNASLQTDTRKELRELMLTTLSVVNVTSMQIALKMSEVLMEITYRSKELSSSAQDDKG
ENRIYILPSRHASVFATVILGWPETDSNNSLYTWSCGFCWPQWDECVQQQSIHTVQREIR
IPPNCLPPPSSAVTVKVVVKSPEKEEKQDEQCLYITAKQDLRLRISRVCSLGLSALLHLN
YLGCCQDILLNVEAGHTLKSVSESLLVVDTEDGDHLKRKEAASYLFSAVSNVLEATLENG
TEKVSVPEVAQNSVSQELVTTVENLQSALLFGKLPDSEPLVLKAPSAAMYINRLQTENVN
STAIKISNSTSAAFTLPSASSLSISGDSDETVDIRMVSFSVNPFSSSDSFDIHGTVGGLT
LTSLDGLVIPVYDLSEDIEIRLPRSPATQEDKTILNLGNFTAVQVNVTSADSSLVIYLEM
DQNIPLILYLGYDYLPNETDHELVAHLPHNRNTRDEVYSWVLHSEDLIFGEGMYYFVVRP
DTELDFLASNEMNISITCFVSKCVFWDEHQKSWNSYGCRVGPKTTPGDTQCLCNHLTFFA
SSFFVMPNTIDVSKTVELFATFVDNPIVVTTVGCIFLIYLLVLIWARRKDIQHDAKVKIT
LLEDNDPFAQYRYLVTVYTGHRRGAATTSKVAMECQILXGLKEPQHLFYPESKYALKRMF
SXITKPYTGRRQEWYVNRLLIHDVATDQKWYFLCNSWLAIDVGDCVLDKVFPVATEQDMK
QFSNLFFMKTSRGFRDSHIWYSIFNPCPRSSFTRAQRASCCFSLLLCTMLTSIMFWGVPK
DPADQKMDLEKRRTPTPERGMGERLKHQDYKRCLHAQLQHVELELELLGPHRFQDPKSYT
QAVRQVQHMKCFLESQLCSAMPESERSSPTPSPPGDNKKELTPKGLPWWFVFVGWFLVVL
TSGVSGFFTMLYGLHYGKDNSIKWLISMAISFFESLFITQPLKVLGFAAFFALVLKKVEQ
EDEENTCIDGPLLGSDPTPIFGARRDSGNNIYQPPPATDIEKMKMDHVKEQKAFALIREI
LAYLGFLWMLLLVAYGQRDPNSYYLNTHIENSFTEGFEEVLSYQDFFKWGRSVLISNLYG
PYEGFITDGNSKLVGSARIRQVRVKGNSCLIDPSLDRTVRECHAAYSFDTEDMEDYGINW
NGSSSDNSSEFQSAWQYQSQARLRGHPIWGKLAVYRGGGYIVHLGMDSANASRFVSFNQT
ATVDAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFATVIIIMFLAY
SIATNLIYGWKLNSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTFV
VLNLFISVILVAFSEEQKHYQASEEEEIVDLMLKKMCSFLGIKYKNDCTPVCGKQLQASG
NDI
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgttgagagtctcaatgagggaagatgcaaagtctgtactttacaagtggtatttagac
cactccttcaaaaagaagtctaatctgctgcctccaggatgcaatttaaatggtttccca
caaagctcactcagttttcttcaaaatgatactgaagttcttgtcctgaacagctcgttt
ttgcaatcgcatggcaaagcctttcaaataaaagcaacagctgtgagtgagaacaaatac
ggagaagaaacctacattgtcagctcggtgcctcctccggtagctccagaatgttctgtg
tctcctccacaaggatccgtgttcaacagcttctccatctcctgccaatcttcctgccta
ttgggccagtgccctccaattgagagctcttcattcatgtattgcttctacctggaatca
aattccctccttcactgtggacaagatccagccctacccttggtctaccttccattggga
gaagaagacaatgactttgttctacagattaaaatttcagtggccaataattatggccat
gctgtttattcaaatgccaccgtcagggtacaacctgaagatataaacagcgggaaccaa
actttgcaggccatggttctggaaaaatcaaacagcatcctaaaaggagaaaataacagc
atgtccctctttcagctgtataaatcagttacttctgttcttaatcaaggaaggaaagaa
gccacctttaatgcatctctgcagacagatacgcggaaagagcttagagagcttatgctg
acaaccctttccgtggttaatgtcacatcaatgcagatagccctcaaaatgtcagaagtc
ctcatggaaatcacgtacaggagcaaagaactgtcttcttctgcacaggatgacaagggg
gaaaataggatatacattttacccagccgccatgccagtgtctttgccacagttatcttg
ggttggcctgagactgacagcaacaattcactctacacttggtcttgtgggttctgctgg
cctcagtgggatgaatgtgttcagcaacaatctatccacactgtgcaaagagagatccgg
attccccccaactgcctgcctcctcccagctcagcagtgacagtgaaggttgtggtgaaa
agcccagagaaagaggagaagcaggacgagcaatgcttgtacatcacagcgaagcaagat
ctgaggctgaggatcagccgtgtctgttcgttgggattatctgcattgcttcatttgaac
tatctgggttgctgccaagatattctattgaatgtggaagctggtcatactctgaagagt
gttagtgaatccttactggtggtggacacagaagatggagatcatctaaagcgcaaggaa
gctgccagctaccttttcagtgcagtaagcaatgtcttggaagctactctggagaatgga
acagaaaaagtctctgtccctgaggtggcacagaattcagtctcgcaagaacttgtaacc
acagttgaaaaccttcagagtgctcttctttttggaaaattgcctgacagtgagcctttg
gtgctaaaagctccttctgcagctatgtatatcaacaggttgcagaccgagaatgtcaac
agcacggccattaaaatctccaactccacatccgctgctttcacgctcccctctgcttct
tctctcagcatctcgggagacagcgatgagacggtggacatcaggatggtgagtttctcg
gtgaatcccttttcctcaagtgactcatttgatatccatggaacagttggaggcctgact
ctcaccagcctagatggactggtcattccagtctatgacctgtcagaagatattgagata
aggttacccaggagtcctgcaactcaagaggacaagactatattgaatctgggaaatttc
acagctgtccaagtcaatgtgacttcagcagactcatctctagtgatctacctggagatg
gatcaaaatattccacttatcctttatttgggatatgactaccttcctaacgagactgat
catgaactggtggcacatcttcctcacaacagaaataccagagatgaggtttattcctgg
gtgcttcattcagaagatttgatctttggagaaggaatgtattattttgtagtgagacca
gacacagaactggacttccttgcttctaatgaaatgaacatctccatcacttgctttgtg
tccaagtgtgtattctgggatgagcaccaaaagagttggaatagctacggatgccgcgtt
ggtcccaaaactactcctggggatactcagtgtctctgtaaccacctgaccttctttgct
agctccttctttgtcatgccaaacaccatcgatgtcagcaaaactgtggagctgtttgcc
acttttgtggacaaccccatcgtggtgacgacggtaggctgcatcttcctgatctacctt
ctggttctgatctgggccagaagaaaagacatccaacatgatgccaaagtgaagataact
ctcctggaagacaatgatccttttgctcaatatcgttatctagtgacggtttataccgga
catcggcgaggtgcagctacgacctctaaggtagcaatggagtgccaaatcttgnntggc
ttaaaagagccacagcacttattttatccggagtctaaatatgcactaaagagaatgttc
tcttaaatcaccaagccatacactggtagaagacaggagtggtatgtgaatcgtcttctc
atccatgatgtggccactgatcagaagtggtattttctttgtaactcttggctggccatt
gacgttggagattgcgtcctagataaagtcttccctgtggccactgaacaagacatgaag
cagttcagcaatctctttttcatgaagacctctaggggcttccgggacagccatatctgg
tactccattttcaacccttgtccacgcagctcttttacccgagcccagagagcgtcctgt
tgcttctcgcttcttctgtgcaccatgttgaccagcatcatgttttggggggtgcccaag
gatccagcagaccaaaaaatggatttagaaaagagaaggactccaaccccagagagaggg
atgggggaaaggttgaagcatcaggattacaagcgttgcctccatgcccagctgcagcat
gtggagcttgagctggagctgctggggcctcatcgcttccaggatccaaagagctacacc
caggcagttcgacaggtccagcacatgaaatgctttttggaaagccagctctgctcggcg
atgccggagagcgaaaggagttcaccaactccaagccctcctggagataacaagaaagaa
ttgacacctaaaggtttaccttggtggttcgtgtttgttggctggttcttggtggtcctg
accagtggagtctctggttttttcaccatgctgtatggattgcattatggcaaggataac
tccatcaagtggctgatttccatggccatctctttctttgagagcctcttcattacccag
ccattaaaggttcttgggtttgctgctttctttgctctggttctgaaaaaagtggaacag
gaagacgaggagaacacatgtattgatggtcctttactgggcagtgatccaactcctatc
tttggagcgcgcagagatagtggaaataacatctaccagcctcctcctgctactgacatt
gagaaaatgaagatggaccacgtcaaggagcagaaagcctttgcactgattcgggaaata
ttggcctacttgggattcttatggatgttgctcttggttgcctacggacagcgtgaccca
aactcctactatcttaacacgcatattgagaacagtttcacagaaggatttgaagaggtt
ttaagttatcaggacttcttcaagtggggaagatccgtcttaatcagcaacttatatggg
ccgtatgaaggtttcatcacagatggcaactccaaactggtggggagtgctcggatccgg
caagtgagggtcaagggcaactcctgcctcattgatccgagcttagatcgcacggtcaga
gagtgtcacgccgcctattcctttgacactgaggacatggaagattatggcatcaactgg
aacggctcttcctcggacaactcttcagagttccagtcggcttggcaataccagagccag
gcaaggctgagaggacaccccatctggggcaagctggctgtttacagaggtggaggctac
attgttcacctggggatggattccgccaatgcctccaggtttgtgagcttcaatcaaact
gctacggtggatgcagtgttgggctacctgattgcgttcctggtgctcctttccaccgtg
aaactttggcatttgttgagactcaaccccaagttgaacatgatcacctccaccttgcgg
agagcctggggggacatatcaggatttgccaccgtgattatcatcatgttcctggcttat
tccatcgctacaaatctaatatatggctggaaactgaattcatacaagactctgtttgat
tctgctgagactatggtcagccttcagttaggaatcttcaactacgaagaggtcctggat
tacaatcctattttggggtccttcttaatcggttcctgtataatctttatgacgtttgtg
gtgttgaacctcttcatttcggtcatcctggtggcttttagcgaggagcagaaacattat
caggcttcggaagaagaagagatagtggacctcatgctgaagaaaatgtgcagtttcctt
ggaattaaatataaaaatgactgcactccagtttgtggcaagcagctgcaagcatctggg
aatgacatctaa
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integrated database retrieval system
