Thamnophis sirtalis (common garter snake): 106555102
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Entry
106555102 CDS
T06107
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106555102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106555102
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106555102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
106555102
NCBI-ProteinID:
XP_013929353
UniProt:
A0A6I9YXG7
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MRCGDLMAAMQVINLGQHQLGDFKTWFQEYMHSKDKRLSPATENKLRLHYRRALRNNTDP
YKRAVYCIIGRCDIADNHSEVADKTEDYLWLKLNQVCFDENSSSAPQDRLTLSQFQKQLL
EDYGESHFAVNQQPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKS
SGQSAQLLSHEAGGPPATRRLNFVRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENM
FLRCVSELVIESREFDMILGKLENDGSRKTGVIDKFTRDTKPIINKVASVAESKGLFEEA
AKLYDLAKNADKVLELMNKLLSPIVSQVSAPQSNKERLKNMAHAIAERYKAQGISTKKPV
DSTFYLLLDLITFFDEYHAGHIDRAFDIIEQLKLVPLSQEYVEERVAAFRHFSDEIRHNL
SEVLLATMNILFTQYKRLKCASPATPARPTRVIEDRDSQLRSQARALITFAGMIPYRTSG
DTNARLVQMEVLMN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcggggatttaatggcagccatgcaagtgatcaacttaggtcagcaccagctg
ggagatttcaaaacttggttccaggagtacatgcacagcaaagacaaaaggctttctcct
gccaccgagaacaaacttcgcctccattaccgacgggctctgagaaacaacactgaccct
tacaaaagagctgtatattgtatcataggccggtgcgatattgccgataaccacagtgaa
gttgcagataaaacggaagattatctttggctgaagctgaatcaagtatgctttgacgag
aacagttctagcgcaccccaagacaggctgactttgtcccaattccagaaacaactgctt
gaagattacggcgaatcgcattttgccgtgaatcagcagcccttcctctacttccaagtc
ttgttcctcacggcccagttcgaagcagccatcgctttccttttccgtactgaacgtttg
cgttgccacgctgtgcatgtggccttggttctctttgaactgaagctgttgctgaaatct
tctgggcagagcgcacaactcttgagccatgaagctggcggccctccagccacccggcgc
ctgaattttgtccggctcctgatgttgtacacccgcaagttcgagtcgacggacccccgg
gaagctttgcagtacttctatttcctcaggaacgagaaggacagccaaggtgaaaacatg
ttcctgcgttgtgtgagcgagctggtgatcgagagccgagagtttgacatgattcttgga
aaactggagaacgatggcagtagaaagactggagttattgacaagtttactcgagacacc
aaaccaattattaacaaagtggcctccgtggcagaaagcaaaggattgtttgaagaagcc
gccaaactttacgaccttgccaagaacgccgacaaggtccttgagctgatgaacaagctg
ctaagccccatcgtgtctcaggtcagcgctccccaatccaacaaggaaaggctgaagaac
atggcgcatgccattgctgagagatataaagcccaaggaataagcaccaagaagccagtt
gactcaacgttctaccttctgttagacctaatcacgttttttgacgagtatcatgctggc
cacattgatcgggcctttgatatcatcgaacagctaaaattagttccactgagtcaggag
tacgtggaggagcgagtcgcagccttcaggcatttcagtgatgaaatcaggcacaatttg
tccgaggtcctccttgccacgatgaatatcttgtttacccagtacaagaggttgaaatgt
gccagcccagccactcccgctcggcccacccgagtcattgaggaccgagattcgcaactc
cgatctcaagctcgggcactcatcacctttgccgggatgatcccctacagaacatcaggg
gacaccaacgctcgcctagtgcagatggaagtcctcatgaactag
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