Thamnophis sirtalis (common garter snake): 106555125
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Entry
106555125 CDS
T06107
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106555125 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106555125 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106555125 (TAF2)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106555125 (TAF2)
Peptidases and inhibitors [BR:
tsr01002
]
Metallo peptidases
Family M1
106555125 (TAF2)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106555125 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
106555125 (TAF2)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106555125 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
106555125
NCBI-ProteinID:
XP_013929375
UniProt:
A0A6I9Z0I8
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVICINSINFQRKSVVGYVELTIFPTVANLNRIKLSSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHADELKVLKIHINFSLDQPKGGLHFVVPNVEGSLAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDATMVAISNGDLVETVYTHDMRKKTFHYMLPIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFVD
EAYVEVAAYASMSLFSTNLLHSAMIIDETPLTRRFLAEALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTISWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQNSVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDHRLMRSRNRNKIRSPLSMDLSDPTSWKNTLPKVTAREEADLENLQNL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaagaaaggagacaaagggtttgagagcccaagaccttataaattaacccat
caggtgatttgcatcaacagcataaattttcagagaaaatctgttgttggctatgtggag
ctgacaatatttccaacagttgcaaacctgaatagaattaaactgagcagtaagcaatgc
aggatatatagagttagagtcaatgatttggaagcagcttttatatataatgatccaaca
ttggaagtttgtcacagtgagtcaaaacagcgaaatctcaactatttttccaatgcctat
gctgctgcagtcagtgctgtggatccagacgctggaaatggagagttgtgtattaaagtg
ccatcagagctttggaagcatgctgatgaattaaaagtgttaaagatacacatcaacttc
tctttggatcagccaaaaggaggactgcattttgtggtacctaatgtggaaggcagcttg
gcagaaagaggcgcccacgttttctcttgtggatatcaaaactctacaaggttctggttt
ccttgtgttgattcgtattcagaactctgcacatggaaactagaatatactgttgatgcc
acaatggtggcaatctcaaatggtgatttagtggaaactgtgtatactcatgatatgaga
aagaagactttccattatatgctgccaatccccactgctgcatctaacatctctttggct
attggaccatttgaaattcttgtcgatccatatatgcacgaggtcacccatttttgttta
ccccaacttcttcccctgctcaaacatactacgtcatacctccatgaagtatttgaattc
tatgaagagatacttacttgtcgttacccttactcctgcttcaaaacagtttttgtagat
gaggcctatgtcgaagtagctgcttacgcgtctatgagcctctttagcacgaaccttttg
cacagtgccatgataatagatgagactcctctaaccaggaggttcttggctgaagctcta
gcccagcagttcttcggctgctttatatctagaatgtcttggtcagatgagtgggtatta
aagggaatctctggctatatttatggactttggatgaagaaaacctttggtgttaatgaa
tatcgtcactggattaaggaggaactagacaaaatagtggcgtacgaattaaagaccggt
ggtgtcttactgcatccgatctttggtggagggaaagagaaggacaaccctgcatcccat
ttacacttttctataaaacatcctcacacgatatcctgggaatactataccatgtttcaa
tgcaaggcccacctagttatgagactgatagaaaacagaataagcatggagtttatgtta
caagttttcaacaaattgttgagtctagctagcactgcttcttctcagaagttccaatct
catatgtggagtcagatgctggtgtctacatctgggtttttgaaatccatttccaatgtg
tccggcaaagacattcaacctttaattaagcaatgggtagatcaaaacagtgtggtcaaa
ttttatggcagttttgcgtttaatcgaaaacgaaatgtactcgaattggaaataaagcaa
gactatacctcccctgggacgcagaaatatgtgggccctcttaaagtgacagtccaggag
cttgacggatctttcaaccacacacttcaaatagaagaaaacagcctcaagcatgatata
ccctgtcattcaaagagcagacgcaataagaagaaaaaaatcccattgatgaatggagag
gaagtggacatggatctttctgccatggaccatcgcctgatgagaagccggaaccgaaat
aaaatacgctctccattaagcatggacctaagtgatcctacaagctggaaaaacacactt
ccaaaagttactgctcgagaggaagctgatctagaaaatcttcagaacctttaa
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