Thamnophis sirtalis (common garter snake): 106555147
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Entry
106555147 CDS
T06107
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tsr00535
]
106555147 (NYX)
Proteoglycans [BR:
tsr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
106555147 (NYX)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
106555147
NCBI-ProteinID:
XP_013929399
UniProt:
A0A6I9YZC7
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MDVFAAKYAVPQCPVDPPMLVETIDGQVLLSGPIKAAMQPLHLTISSHEEAIQFYITSGL
HFPVVLGLAWLRTHDLQLYWPQNFISFLSLQCVDHTCQVCAGRLLNPSWMSLPSDIADFM
NVFSEQEAGQLPPHRPYDCPIDLIPDAPLPVGIFFLCICPVHSVWACVRSCPASCICTEE
KSCAILCDRAGLAQIPNEFPCEAYSINLDKNSIKFLAERAFGTLPSLKSLSISHNNISFI
TPGAFKGLASLTELKMAHNEYIRYLHTRTFISLQRLIRLDLADCNLFNIPDRIFIELPAL
QELFFFQNNFRRIPGAIRGMENLTHVYLEKNKIEAVAYNSLLGLIQMKYLNLQVNRINVI
HNRAFQDCQKLEYLYLNDNLISDLPKNSFDGLRHLKMLNLGGNFLKIVSNTWFQDQSELE
VLYLDRNWISYIEEGAFENLTSLVYLHLNSNNLTTLPFLVFQPVYLLGRLYLFRNPWECD
CKIQWLKEWMKNYGLVRDIPCASPSSVVGLDLIDVIFEKTDEGLCLNPEELNTSSSTPLP
MQELQSTTENKFHSLISKFLLQKGLSEEVINTTEGFSNTTLLDELINEASLGLREWHIKQ
IYFNIWVFFIAQALWTI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgtttgcagccaaatacgcagtccctcagtgtccagtggatcctcctatgctc
gtggagaccattgatggccaggtgcttctgtctgggcctattaaagccgccatgcaaccc
ttgcacctgaccatcagttctcatgaggaggccatccagttctatattacctctggcctg
cattttcctgtggtcttgggcttggcttggctccggacgcatgatctgcaactctactgg
ccccagaacttcatctctttcctgagcctgcaatgcgtggaccacacctgccaagtctgc
gcaggccggttgttgaatccatcttggatgtccttgccttctgatatagcagacttcatg
aatgtcttcagtgagcaagaggcgggccaattgcccccacaccggccatatgactgcccc
attgatttgattccagatgcaccactcccagtgggcattttctttctttgcatctgccct
gtgcattcggtgtgggcttgtgtccgttcctgtcctgccagttgtatctgcactgaagag
aagagttgtgccattctttgtgaccgagctggccttgcacagatccctaatgagtttcct
tgtgaagcatattctattaacttggataaaaatagcatcaaattccttgctgagagagca
tttggtactctcccgtccctaaaatctctctctataagccataacaacatatcatttatt
actcctggtgctttcaaagggcttgctagcttaactgagttaaaaatggcccacaatgaa
tacattcgttatctgcataccaggactttcatttctctccagaggctaatccgattggat
ttagcagactgcaatcttttcaacattccagacaggatttttatagagcttccagctctc
caagaactctttttttttcagaataatttccgaaggatcccaggagctataagagggatg
gagaatttgactcatgtttatttggagaaaaacaagatagaagctgtagcatataattca
cttctgggcctgatccagatgaaatatctcaatctgcaagtcaacagaataaatgtcatt
cacaatagagcttttcaggattgccagaaattggagtacctttatttaaatgacaattta
atcagtgacctccctaagaattcctttgatggtctgcggcatctaaagatgcttaatctt
ggtggcaactttctcaagattgtctctaatacttggttccaggatcaatctgaactggaa
gttttgtatttggacagaaactggatcagttatattgaggaaggtgcttttgaaaacctc
acaagcttggtatatttgcacttgaacagtaacaatctaactacgttgcctttcttagtc
tttcaaccagtctacctcctaggaagactctaccttttccggaacccctgggagtgcgat
tgcaagattcagtggctaaaagagtggatgaagaattatggacttgtgagagatattcct
tgtgcttccccatcttcagtagttggccttgacctaattgatgttatttttgagaagaca
gatgaaggtttatgtcttaacccagaagaattaaacacctcttcttctacgcctcttccc
atgcaagaattacagtcgactacagagaataaattccacagtcttatctcaaaatttcta
ctccagaagggactttcagaggaagtgattaacactacagaaggtttcagcaacactact
ctgttagatgaattgattaatgaagcatctttaggactaagagaatggcatataaaacaa
atatattttaatatttgggtattctttatagctcaagcattatggaccatataa
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integrated database retrieval system
