Thamnophis sirtalis (common garter snake): 106555194
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Entry
106555194 CDS
T06107
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106555194 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106555194 (IRF6)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
106555194 (IRF6)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106555194 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
106555194
NCBI-ProteinID:
XP_013929449
UniProt:
A0A6I9YZH8
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MASHPRRVRLKPWLVAQVDSGMYPGLLWLNRDAKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFKLIYDGTKEVPMNPIKIYEVCDIPPSL
TPIINPGSTGSVPWDEKDNDVDDEDEDELNESQHVAIQESFPFLNINDSPMAPASAETCS
PEAVWPKNEPEDMEMPMPPALPALPHDMYSSPELWISSLPMTDLEIKFEYRGKEFGQTMT
VSNPQGCRLFYGELGPMPDQEELFGPINLEQVKFPGPESIPNEKQKLFTSRLLDVMDRGL
ILEVSGHAIYAIRLCQCKVYWSGPCAPSSTTPNLIERQKRVKLFCLETFLSELIAHQKGQ
ISKQPPYEIYFCFGEEWPDGKSKERKLIVVQVIPIVARMIYEMFSGDFTRSFDSGSVRLQ
ISIPDIKDNIVAQLKQLYRLLQNHQETWPVQPPNMQMTPPLTAQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacatccacgcagagttcgactgaaaccctggctagtagctcaagtagacagt
ggaatgtatccaggtcttctgtggcttaatagggatgcaaagcgatttcaaattccttgg
aagcatgcaactcggcatagtcctcagcatgaagaagaaaatacaatttttaaggcgtgg
gctgtggaaacaggaaagtatcaagaaggggttgatgatcctgaccctgcaaaatggaaa
gcccaactacggtgtgctctcaacaaaagccgtgaattcaagctcatatacgatggtacc
aaagaagtgccaatgaatccaattaaaatttatgaagtatgtgacatcccaccatccctg
acgccaattattaatcctggttccaccggttcagttccatgggatgagaaggataatgat
gtagatgatgaagatgaagatgaattaaatgagtctcagcacgtagcaatacaggagagt
tttccatttcttaatatcaatgattccccaatggctcccgccagtgcagagacctgtagc
cctgaagctgtgtggccaaagaatgaacctgaagatatggagatgccaatgccccctgcc
ttgccagctctaccgcatgatatgtacagctctcctgaactttggattagctctcttcct
atgacagatcttgaaatcaagtttgaatatcgtggcaaggagtttgggcagacaatgact
gtgagcaatccccaaggctgcagacttttctatggagaattaggtcctatgccagatcaa
gaagaactcttcgggcctattaatttggagcaagtcaagtttccagggcccgaatccatc
ccgaatgaaaaacaaaagctgttcaccagtcgactgcttgatgtaatggacagagggcta
atactagaagtcagtggtcatgctatctatgctatcaggctttgccagtgcaaagtatat
tggtctgggccatgtgcaccttcctctaccacaccaaacttaattgaaaggcagaagaga
gttaagctcttttgtttggaaacatttctaagtgagttaattgcccatcagaaaggacag
attagtaaacagccaccatatgagatctacttttgttttggagaagaatggccagatggg
aaatcaaaagagcgaaagctgattgttgttcaggtcattccaattgtagcacggatgatc
tatgaaatgttctctggtgacttcacccgctcctttgacagtggcagtgtgcgtctacag
atctctatcccggatatcaaggataacattgttgcccagctaaaacaactctaccgtctg
ctgcagaatcaccaagaaacttggccagtgcagccaccaaatatgcagatgaccccaccc
ctcacagcacagtga
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