Thamnophis sirtalis (common garter snake): 106555214
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Entry
106555214 CDS
T06107
Symbol
GLE1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
tsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106555214 (GLE1)
03015 mRNA surveillance pathway
106555214 (GLE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106555214 (GLE1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106555214 (GLE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
106555214
NCBI-ProteinID:
XP_013929474
UniProt:
A0A6I9YZK5
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MPSEQFRMETVEALRNTRKGRLRYCRDWSPLEEEQLNQRLEQQDQAVKAASEEASELLKR
FDEMKELKQHQEYQHLQQEIENSSKEAQGQQEKLKEEHRRRAKLLSRKLREAEQQRQRQE
DLERQRREESQERLRRLYAIQEEVLQIHQQIGLNARHKELPAIDFSLYNTRGNHLCGEVS
ALVRMANEAFPTEADVASADHALLKMHQLLSGMQQEIALALEEKKKQEEKLAMAEAAAAE
AKKTEELQKEDLAKSQPLDSGKLAGGKTFNQFLCFFGIFQLIESITSPGEMGSLIRFKQF
LKQITAVVKLVTPSLSKFGFPLDFIRQKVTNGHPISQDTANCSQLKEIFEKINSLLSGKY
VHCGGHRISVTQHPEGLEFVYFKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPKV
GTLTLAHLHKKCPYAVPFYPAMKEGTPLEEYQRILGYQVKDGKVEPQDNFLKRMSGMIRL
YAAILQLQWPYRDKQGTHPHGLNHAWRWLAQILNMEPLADVTATILFDFLEVCGNALMKQ
YQGQFWKMLLLIQEEYFPRYGQSGVCVCVCVWKVSGDSQPSKLWLPLLGEA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggagcagtttcggatggagaccgtcgaggccctgcggaacacccgcaaaggg
cggctgcgctactgccgagactggagcccgctcgaggaggaacagctgaatcaacgcttg
gagcagcaggaccaggcggtgaaggcggcctccgaggaggccagcgagttgctgaagcgc
ttcgatgagatgaaggagctgaagcagcaccaggagtaccagcacctgcagcaagagata
gagaacagctccaaagaagcccaagggcagcaggagaagctgaaggaggagcataggcgc
agagccaaacttttaagccggaagctccgtgaggctgagcagcagcggcaacggcaggag
gacctggagcgccagcggcgggaggagagccaagaacgcctacgccgcctctacgccatc
caggaggaggttttgcagatccaccagcagattggcctcaacgccaggcataaagagctg
cccgccatcgacttctcactctacaacacccgtggcaatcacctctgcggagaggtgtcg
gccttagtccggatggccaatgaggctttccccaccgaggcagatgtggcttccgctgat
cacgccctgctcaagatgcaccaactgctgtctggcatgcagcaagaaattgctctcgcc
ctggaagagaagaagaagcaggaggagaagttggctatggctgaggcggcagcagccgag
gccaaaaaaacagaggaactgcagaaggaggatctggcaaaatcccagcctttggattcc
ggaaagcttgctggaggtaaaacattcaatcaattcctctgcttttttggcatcttccag
ctgatcgaatcaattaccagccctggggaaatgggctccctcatacgattcaagcaattt
ttaaaacaaatcactgcggttgttaaattagtaacgccgtcgttaagtaaatttggtttc
ccccttgacttcatccgtcagaaggtcaccaatgggcaccccatctcccaggacacggca
aactgttcccaactgaaggagatctttgagaagatcaacagcctcctctcagggaaatac
gtgcactgcgggggtcatagaatatccgtcacgcagcaccccgaaggcctggagtttgtt
tatttcaaattggctgaaaagtttgtgaaacaaggcgaagaagaggtggcctctcaccac
gaagcggcattccccattgctgtggtggcgtctggcatctgggagcttcaccccaaggtg
ggcactctcaccttggctcacttacataaaaagtgcccttacgccgtgcccttttaccct
gcgatgaaggaaggcaccccgctggaagagtatcagaggatactcggctaccaagtgaag
gacgggaaagttgagccgcaagataactttctcaaacggatgtctgggatgatccgactc
tatgcagccatcctgcagcttcagtggccttaccgagataagcaagggactcacccacac
gggttaaaccatgcctggcgttggctggcccagattttgaacatggaacctctggcagat
gtgacggcaacgattctctttgatttcctggaggtgtgtgggaacgctctcatgaagcag
taccaggggcaattttggaagatgcttctcctgatccaggaagagtatttccctaggtat
ggtcagtctggtgtgtgtgtgtgtgtttgtgtgtggaaggtctctggagattctcagcca
tccaagttatggttgccccttttgggggaagcctag
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