Thamnophis sirtalis (common garter snake): 106555246
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Entry
106555246 CDS
T06107
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04020
Calcium signaling pathway
tsr04218
Cellular senescence
tsr04260
Cardiac muscle contraction
tsr04261
Adrenergic signaling in cardiomyocytes
tsr04270
Vascular smooth muscle contraction
tsr04530
Tight junction
tsr04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106555246
04020 Calcium signaling pathway
106555246
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106555246
09144 Cellular community - eukaryotes
04530 Tight junction
106555246
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
106555246
09153 Circulatory system
04260 Cardiac muscle contraction
106555246
04261 Adrenergic signaling in cardiomyocytes
106555246
04270 Vascular smooth muscle contraction
106555246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106555246
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106555246
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
106555246
NCBI-ProteinID:
XP_013929519
UniProt:
A0A6I9YZQ2
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
EKVEYAFLIIFTIETFLKIVAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKET
EGGSHSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV
IIIYAIIGLELFIGKMHKSCYFEDSEILVEEEPAPCAFSGSGRQCPQNGTECKGGWPGPN
GGITNFDNFGYAMLTVFQCITMEGWTDVLYWVNDAIGCEWPWIYFVSLIILGSFFVLNLV
LGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGDGEGK
RNTSMQASETESVNTENVAGEGETTCCGNLCQIISKSKFSRRWRRWNRFSRRRCRAAVKS
VSFYWLVIVLVFLNTLTISSEHYNQPDWLTEIQDIANKVLLALFTCEMLIKMYSLGLQSY
FVSLFNRFDCFVVCGGIVETILVELQIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVAS
LLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQIL
TGEDWNAVMYDGIMAYGGPSSSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLN
TAQKEEAEEKERKKSARKESLDAKKGDKPEGESKKAKDTKVIINEYGEEQEEDKDPYPPC
DIPVGEEEEEEEEPEVPAGPRPRRISELNMKEKMTPIPEGSSFFIFSTTNPIRVGCHRLI
NHHIFTNLILVFIMLSSASLAAEDPIRSHSFRNNILGYFDYAFTAIFTVEILLKLTVFGA
FLHKGSFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKV
SI
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
gaaaaagtagaatatgccttcttgattatttttacaattgaaacatttttgaagattgta
gcatatggattattattacaccccaacgcatatgttagaaatggatggaatttactggat
tttgtaatagttatagtaggattgtttagtgtaattttggaacaattaaccaaagaaaca
gaagggggtagccattccggtggcaaaccaggtggttttgatgtaaaagctctaagggcc
tttcgtgtcctgagacccctccggcttgtatcaggagtgcccagtttacaagttgtcctg
aattcaattataaaagccatggtacccttactccatattgcccttttggtattatttgta
atcataatctatgctattataggattggaactttttattggaaaaatgcacaaatcgtgt
tattttgaagattcagaaatattagttgaagaggaacctgcaccttgtgcattctcaggg
agtggacgtcagtgtccccaaaatggcactgaatgtaagggtggctggcctggaccaaat
ggaggcataacaaactttgataattttggttatgcaatgttaacggtattccagtgtata
accatggaaggatggacagatgtgctatactgggtaaatgatgcaataggatgtgagtgg
ccatggatctattttgttagtcttatcattctgggctcatttttcgtacttaacctggta
cttggtgtacttagtggagaattttccaaggaaagagaaaaagccaaggccaggggagat
tttcaaaagctacgtgagaaacaacagctagaagaagacctcaaaggttacttggattgg
attacccaagcagaagacattgacccagagaatgaagaggaaggtgacggagaaggcaaa
cgaaatacaagcatgcaagcaagtgagaccgaatcagtgaatacagaaaatgtggctggt
gaaggagagaccacatgctgtggaaatttgtgtcaaattatctcaaaatccaagttcagc
cgacgctggcgtcgatggaaccgctttagccgaagacgatgcagagcagctgtaaaatct
gtttctttttattggttagtcattgtcctggtcttcctaaacacattaactatctcatct
gagcattataatcagcctgactggctaacagaaatacaagatattgcaaacaaagtcctt
ctggctttattcacctgcgaaatgttaataaaaatgtacagtcttgggctgcagtcttac
tttgtgtccctttttaatcgttttgactgctttgtggtctgtggcggcattgttgaaacc
atcctggtggagctgcaaattatgtcccctctcggaatttcagtgttccgctgtgtccgt
ctcctccgtatttttaaagtcaccaggcactggacatccctgagcaacttggtagcatcc
ttgttaaactcaatgaagtccattgcttcactgttgcttctgcttttcctcttcatcata
atcttctcattgcttggaatgcagctgtttggaggcaaatttaattttgatgaaactcaa
acaaaacggagcaccttcgataatttcccacaagcccttttaactgtattccagattcta
acaggtgaagactggaatgctgttatgtatgatggcattatggcatatggaggcccatct
tcatcgggaatggtagtctgtatttacttcatcatcctcttcatctgtggtaactatatc
ctgttaaatgtctttttggctattgcggttgataacctggcagatgctgaaagtctgaac
acagctcagaaagaagaagctgaagaaaaggagagaaaaaagagtgccagaaaagagagt
ttggatgctaaaaagggggacaaaccagagggtgaatcaaagaaggccaaggatactaag
gttataatcaatgaatatggagaagaacaagaagaagacaaagatccgtatccaccttgt
gatatcccagtaggtgaagaggaagaagaggaagaagagccagaagtacctgcaggtccc
cgaccccgaagaatatcagaacttaatatgaaggagaagatgacaccaattcctgaaggc
agctccttctttattttcagcactacaaacccgattcgagtgggttgtcatagattaatc
aatcaccatatttttaccaacctcattcttgtcttcatcatgctcagcagtgcttccctt
gcagctgaagaccctattcgcagtcattcttttcgaaataatatacttggttattttgac
tatgctttcacagccatctttactgtggaaatccttttaaagctgaccgtgtttggagcc
ttccttcataaagggtctttctgcagaaattattttaacttgctagacttgttggtagtg
ggtgtttcccttgtgtcatttggcattcaatcaagtgctatatcagttgtgaagattctg
agagttttaagagtcttaagaccattaagggctattaacagagcaaaaggacttaaggtt
tctatctga
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