Thamnophis sirtalis (common garter snake): 106555285
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Entry
106555285 CDS
T06107
Symbol
PPARGC1B
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106555285 (PPARGC1B)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
106555285 (PPARGC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Penaeidin
Motif
Other DBs
NCBI-GeneID:
106555285
NCBI-ProteinID:
XP_013929577
UniProt:
A0A6I9YZ36
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MGLAVFKNMDEGDMPNSGYTSPIPSPNPAAPVTRGPPVAQEVDELSLLKKLLLSPSNVPP
SYEVQREGNICRQGPSKSRPQRSCAKVESVHDRKTTFPQAQSRNCTELHKHLTTTTTTRH
CPHRKNSGPLDMCHADNITTCSVPQRHYIQNEEDSNLSKDASNCSNSVAPPLSSSEKGTG
DKELHATVELIHYMHTYCLPPRKMPPIHPGEGKYQPFHSPSKRAKSDPPLQQSPLCGNDN
CPSSPWHFSMHCKQSRTPLSEFSILKELLARELPCDVSKPYRFAKPVYASLARSQLHKSS
RTSPHNTGRESTDGYNKPTNKIIPEMKTELRQSLKVEPEAEKGNAEEDGAKQGIHMGQGS
YGKSNRKTDTSIYAVRRSKRLNPELSVWQSFLDKPPSEPTVSSAATGNAFASIEPALCSS
LQNFDTEAPAAEVEVSGADEMDGGFQSFPMELQTPSPESSRENDTYAANESQCFTPCHQT
EAPRCLSLPLAQTESTLGKRSFDQVLTVELCGTAGLTPPTTPPYKPSEEDLYKPDIHQRP
AQKTAVITSSEPQPMISHRPISRKHQKKQPVRTELYAHLSRSAIRPAHSEQHGVLKRPFS
RSFGDHDYCQVLKPEYSLQRKVLRSWEPLSHIESQHKRQVPDVPYQEESNKSFDKSSVKE
GSKQLRDQEIRASLTKHFGLLDSALDDGEEALFFKTPEYDTVFEDSCSEIGSPLEEEEEE
EEEEYYMSPLGSNRCLHSSALSRTNLHYCSRNRSDSESSCCRSRSPVNQQVFRRENGKRG
QEGNMSSQRLMEKKREKAIGEGRVVYIQNLASSMSSSELKKQFEVFGEIVECCILTKNKR
GDKYGVITYRCSEHAALSLKNGASLWKRNEPLFQLAYGGFGHFFWTRFTDLADSNTEESS
PTPVKSKYETMDFDSLLQEAQESLHR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgggtctggctgtcttcaaaaatatggacgagggggacatgcccaacagcggctacacc
tcacccatcccctctcccaatcctgctgcaccagtcacgagggggcctcctgtggcccaa
gaggttgatgagctgtctctactaaagaagttgcttctctcaccatccaatgtgcctcca
agctatgaggttcaaagagaggggaatatatgccgtcaaggaccttctaaatccagacct
cagcgatcgtgtgcaaaggtggaaagtgtccatgacagaaagacaacttttccccaggct
cagagtcggaactgcactgagcttcataaacatcttactacgaccaccaccactagacac
tgcccgcacagaaaaaacagtgggccactagacatgtgtcatgccgacaacattaccact
tgctctgtaccccagagacattacatccaaaacgaagaagatagcaatttaagtaaagat
gcatcgaattgcagtaacagtgtagcgcctcctctctcttcctccgagaaaggcactgga
gacaaggaacttcatgctacagtggagcttatccactacatgcatacttattgccttcct
ccaagaaagatgccccccattcaccccggtgaggggaaataccagccttttcatagcccc
tccaaaagagcaaagtcagatccccccctgcagcagtctccactctgtgggaatgacaat
tgcccatccagcccttggcatttctccatgcactgcaaacaatcccgaactcccctttct
gaattttccatcctgaaagaactgcttgccagagaactcccatgtgatgtgagtaagcca
tatcgatttgcaaaacctgtctacgcctccttggccaggtcacagcttcacaagtcttca
agaacttcacctcacaataccggcagggaatctacagatggatacaataagcccaccaac
aaaataatacccgaaatgaaaactgagctgagacagagtctcaaagtagagcctgaggct
gaaaaaggaaatgcagaagaggatggtgcaaaacaagggatccacatgggtcagggatcc
tacgggaagtcaaaccgcaagacggacacctctatttatgcagtgcgtcgctctaaaaga
ctcaaccctgagctcagtgtttggcagtctttccttgataaacctccctcagaacctacc
gtatcctcagcggccacaggaaacgcattcgcttcaatagagcctgccctctgctcatct
ttgcaaaactttgatacagaagcaccagcagcggaagtagaagtgagcggcgctgatgag
atggacgggggattccagagtttcccaatggaattgcagaccccttcaccagaaagttcc
agggaaaatgacacttatgcagcaaatgagagtcagtgcttcaccccctgccatcaaaca
gaagcaccacggtgtctgtcattgcccttggcacaaacagaatcaacactcgggaagcgc
agctttgatcaagttctgactgtagagctatgtggcactgcaggtctcacaccaccaact
actcctccatacaagccttcggaagaggacctatataagccagacattcaccagagacca
gcacagaagactgctgtcatcaccagctctgagccacaacccatgatcagtcataggcca
atttccagaaagcatcagaaaaagcaaccagtgcggacagagctgtatgcccacctgagt
cggtctgctattcgccctgctcactctgagcaacatggggtgttgaaacgccctttctca
cggtcttttggtgatcatgattattgccaagtcttgaaacctgagtattcgctccagagg
aaggtgctaaggtcttgggagcccctgagccatatagaaagccaacacaagaggcaagtg
cctgacgttccctatcaggaggaaagcaacaagagttttgataaaagctcagtgaaggag
ggcagcaaacagctgagggaccaagaaatcagagccagtttgaccaaacactttggtctt
ttggacagtgccctggatgatggggaggaggccttgttcttcaaaactcctgaatatgat
actgtctttgaagacagctgcagtgagattggttctccattggaagaggaagaagaggaa
gaggaggaggaatactacatgagtccattgggttccaacagatgtctacacagtagtgct
ctttctaggaccaatttgcactattgctcccgaaacagatctgattcagagtcttcgtgt
tgcagaagtaggtctccagtcaaccagcaggttttcagacgtgaaaatggcaagcgtggt
caagagggaaacatgagcagccagagactgatggagaaaaagagagaaaaagccattgga
gaaggccgtgtagtatacatccaaaatcttgccagcagtatgagctctagtgaactgaag
aagcaatttgaagtgtttggagagattgttgagtgttgcattttgaccaagaataaaagg
ggagataaatatggtgtcatcacataccggtgttctgagcatgctgccttgtccttgaag
aatggtgcttctctgtggaaaagaaatgagccattgttccaactggcttatggcggcttt
ggacacttcttttggaccagatttactgatttggcagattccaatacagaagagtcctct
ccaactccagtaaaaagcaaatatgagaccatggattttgacagcctgctgcaggaggcc
caggaaagtctgcatcggtaa
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