Thamnophis sirtalis (common garter snake): 106555377
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Entry
106555377 CDS
T06107
Symbol
SCMH1
Name
(RefSeq) polycomb protein SCMH1
KO
K11461
polycomb protein SCMH1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106555377 (SCMH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106555377 (SCMH1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
106555377 (SCMH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
106555377
NCBI-ProteinID:
XP_013929688
UniProt:
A0A6I9YYB9
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MRKPSPQKAIDWKDGKKHKYGRLSEPPSQYQGHFAWDKYLKETCSIPAPAHCFKQSYAPP
SNEFKISMKLEAQDPRNTTSTCIAAVVGLTGARLRLRLDGSDNKNDFWRLVDSTEIQPIG
NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSQNFFKMGMKLE
AVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQP
PGTKVVIPKTPFPTPDVISEKSTMHNTARSILEHLPGQKGRKPGRKRGRTPKVLTSHPNP
NPSKAVEPLKFPKKRGPKPGGKRKQRMLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAM
QAPTVCIYLNKNGSPGPHLDKKKIQQLPDHFGPARASIVLQQAVQACIDCAYHQKTVFSF
LKQGHGGEVISAVFDHEQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQHHMH
HSRDYDHDKYLPDRSVSLDGSLQGPGRGTKRYSQEFLPYSAPLSPKLPKNDHHPLEGETF
VLNDSLPGPLEPRLDPIDSALNAVSMSSPIRNSRDFRLQGYRHLHQPSSLTQCSTPAGHR
LSAGGSDRYLSSRDTSRLGTRHPSAWTVEDVMQFIRDADPQLGPHADLFRKHEIDGKALL
LLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcccagccctcagaaagcaatagattggaaagatggcaaaaagcacaagtat
ggacgtctgtctgaacccccttctcagtatcaaggtcattttgcctgggataaatacttg
aaagagacatgttccatcccagctcctgcccattgcttcaagcagtcttatgccccaccc
agcaatgaattcaagatcagcatgaagttagaagcccaagaccccagaaacaccacgtca
acttgtattgccgctgtggtggggctgacgggtgcccgtctccgattgcgtctcgatggc
agtgacaacaagaacgacttctggcgtctggtagattccacagaaattcagcccattggc
aactgtgaaaaaaatggcgggatgctgcagcctcctttaggttttcgtctgaatgcttcc
tcttggcctatgtttcttctgaagactctgaacggagcagaaatggctcccattcggatt
ttccataaggagccaccatctccatcccagaatttctttaagatggggatgaaacttgag
gctgtagacaggaagaacccacatttcatctgcccagccactattggtgaggtacggggt
tctgaagtccttatcacttttgatggctggaggggagcctttgattactggtgccgctat
gattctcgtgacatctttcccgttggctggtgctcattgactggtgacaatttacagccc
cctggaacaaaagttgtcattccaaagaccccgttccctacccccgacgtgatctccgaa
aaaagcaccatgcacaacaccgcaaggagcatcctggaacatctgcctggacaaaaaggc
cgaaaacctggtcgtaaaagaggccggacacccaaggtgctgaccagccaccccaacccc
aacccttccaaggcagtggagcctttaaaattccccaaaaagagggggccaaagcccggt
gggaagagaaagcagcggatgttactaaacccagcacccacttccccgacaacgagcact
cctgagcctgacacaagtacggtaccacaagatgcagctactattcccagttctgctatg
caggcccctacagtttgcatctacttgaataaaaacggtagccccgggcctcacctggac
aaaaagaaaatccagcaattgcctgaccattttggtcccgctcgagcatccatagtcctg
cagcaagcagtccaagcttgcattgactgtgcttaccaccagaagactgtcttctcattc
cttaaacaaggccatggaggagaggttatttcagctgtgtttgatcatgagcagcacact
ctaaacttaccagcggtgaatagcatcacttacgtcctccgtttccttgagaagctttgt
cacaacctgcgtagtgacaacctctttgggaaccagcccttcactcagcaccacatgcat
cattccagagactacgaccatgacaaatacctaccagacaggagcgtttcgttagacggc
tctctgcagggaccaggccggggtacaaagaggtattcccaagagttccttccatacagt
gctcctctgtcccccaagttaccaaagaatgaccatcaccctttggaaggggaaaccttt
gtcttgaacgacagtctccctggacctctggagcctcgcttggacccgattgactccgcc
ttgaacgccgttagcatgtccagtcccattcggaactcaagggacttccggctccaggga
taccggcacctccatcagccctccagcctcacccagtgcagcacccctgctgggcacagg
ctgagtgctgggggctctgacagatacctgagttctcgagacacttcacggttggggacc
cggcatccctctgcctggacggtagaagacgtcatgcagtttataagagacgctgacccc
cagctgggaccccacgcagatctcttccgaaaacacgagattgacggcaaggccttgctc
ctgttgcgtagtgacatgatgatgaagtacatgggcttgaaactggggccagcgctgaaa
ctcacctaccacattgacaagttgaaacagggcaagttctga
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