Thamnophis sirtalis (common garter snake): 106555453
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Entry
106555453 CDS
T06107
Symbol
TBC1D8B
Name
(RefSeq) TBC1 domain family member 8B
KO
K19951
TBC1 domain family member 8/9
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106555453 (TBC1D8B)
Membrane trafficking [BR:
tsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106555453 (TBC1D8B)
Endosome - Golgi transport
Rab GTPases and associated proteins
106555453 (TBC1D8B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
106555453
NCBI-ProteinID:
XP_013929786
UniProt:
A0A6I9Z140
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MWLKPEELLLKSALRLWVQERCNRFFVLQRRRGYGQEGGGGGGLAGLLVGTLDAVMDSTS
KVAPFRILHQTPDSQIYWTIACGTSREEITEHWEWLERNMMDTLSVFDSNEDIVSFVHGK
IQGLIAEENKGSLVREEDPEKFREAHLKFEKCFGLAEQEKLVTYYSCSYWRGRMPCQGWL
YLSTNFLSFYSFLLGAEIKLIIAWDEISKLEKTSTVILTESIHVCAHGEDHYFSMFLHLG
ETFLLMEQLALYAVRRLFDKEAFEGDPLLCNPLQITKRGLENRAHSEQFNAFFRLPSEET
LREVHECFLWVPFSHYNTLGKLCLSENFLCFASQDGCLCSLIVPIREVTSVEVADHASRA
ITVATKGSRAFRFSEVRDFEALVVKLRTRCTAALSPHRSTSAGAGASPETPTAWEDYEGQ
TMASHKGSSATVSTEALMTVFHPQDAENLDPKMLKEKMKEQSWNILFIECGRGVSMFRTK
KTRDLVVRGIPEVLRGELWLLFSGAVNDMASHPGYYSELVEISFGTFTLETDEIERDLRR
SLPEHPAFQSDTGISALRRVLTAYAHRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVAI
CERMLPDYFNRRIIGALVDQAVFEDLIREYLPQLTEHMTDMTFFSSVSLSWFLTLFVSVL
PIESAVNAVDCFFYDGIKATLQLGLAVLDYNLEKLVACKDDAEAVTVLSRFFESVTNKDS
PLPPAVQQASGMNEGKTPHPRVDITDLIRESNEKYGEIRFEEVESMRRRNRLYVIQTLEI
TTKQNVLRVVSQDVSLNPRNLEELYELFKKEHFLSCYWKPNSPALKHHDASLPYLDQYRI
DCQQFRTLYHLLSPWAHCANRDSLALWTFRLLDENVDGLINFKEFSSVWDVLYHGSFTHK
LTMLFKLHIPPAFTEVESLSPLKGTQLSKEELIHFSQLSVSSPEDKDNADGLKTSPEKGK
GKVDVQAYLKQWQDEILKKEESIKDLPRMNQSQFIHFSKTLYNLFHGDPEEELLFRAIAT
VTGLLLRMEEVGRKLQSPTSPTRRGTSPTGGPALASSQRDDPGAPVSVPVSEGWSFAFEQ
ILASLLNEPALVRFFEKPVDAGAKLESAKASQLKARPAL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagcccgaggagctgctgctgaagagcgccctgcggctgtgggtgcaggag
cgatgcaaccgcttcttcgtgctgcagcggcgccgcggatacggccaggagggcggcggg
ggaggcgggctggccggtctcctggtcgggacgttggatgccgttatggattccacatcg
aaagtagcccctttccgtatcctacaccagaccccggattcccagatttactggactatt
gcctgcggaaccagccgagaagagataacggagcactgggaatggctggagcggaatatg
atggacactctctccgtctttgattccaacgaggacatcgtaagctttgtgcacgggaaa
attcaaggcttaattgctgaggagaacaaggggtctttagtaagagaagaggatccagag
aagttccgggaagcccatctgaagtttgagaagtgctttggcttggccgaacaggagaaa
ctcgtgacttactactcgtgtagctactggagagggcggatgccctgccaaggctggttg
tatctgagcactaatttcctcagcttttactcattcctgctgggagccgagatcaaactc
ataatagcctgggatgagatctccaaacttgaaaaaacttccacggtgatcctgacagaa
agcatccacgtttgtgcccacggggaggaccattacttctccatgtttctgcacctgggc
gagactttcctcctcatggaacagctggctctctacgccgtccgcaggctcttcgacaag
gaggccttcgagggtgaccccctcctctgcaaccctctgcaaatcaccaagagggggctg
gagaaccgggcgcacagcgagcagttcaacgccttcttcaggctgcccagcgaggagacg
ctgcgggaggtccacgagtgtttcctgtgggtgcccttcagccactacaacaccctgggg
aagctgtgcctctcggagaacttcctctgcttcgccagtcaagacggctgcctctgcagc
ctcatcgtccccatcagagaggtcacttcggttgaggtggctgaccacgccagcagggcc
atcaccgttgccaccaaaggatcccgggctttccgcttctcggaagtgagagattttgaa
gccctggtggtgaaactgaggacgagatgcactgcagcactcagcccccatcgcagcacc
agtgcaggggccggggccagcccagagacccccaccgcctgggaggactacgaggggcag
acgatggccagccacaagggcagcagcgccacggtgagcacggaggccctgatgaccgtc
tttcaccctcaggatgcggagaacctggatcccaagatgttaaaagagaaaatgaaagag
caatcctggaacatccttttcatagagtgcggacgaggcgtcagtatgtttcggacaaag
aaaacgcgggacctggtggtcagaggaattcccgaagtcttaaggggagaactttggctt
ctgttctcaggtgctgtcaatgacatggcaagccatcctggctattactcggagctcgtg
gaaatatcctttgggacgttcaccctggagacggacgaaatcgagcgggatctgcgccgc
tcactgcccgagcaccccgccttccagagcgacacgggcatttcagccctccggagggtc
ctcacggcctacgcccaccggaaccccaagatcggctattgtcaggccatgaatatattg
acgtcggtgctgctcctttatgccaaagaagaggaagcattttggctcctggtggccatc
tgcgaacggatgctgcccgattatttcaaccgccgaattattggcgccttggtcgaccag
gccgtgtttgaggacctgatccgcgagtacttacctcagctgacggagcacatgaccgac
atgactttcttctcctccgtctcgctctcctggttcctcaccctcttcgtcagcgtgctg
cccatcgagagtgccgtcaacgcagtcgattgctttttctacgacgggatcaaggccacc
ttgcagctgggcctggccgtgctggactacaacctggagaagctggtggcctgcaaggac
gacgcggaagccgtcactgtgctcagcagattttttgagagcgtgaccaacaaggacagt
ccgctgcctccagccgtccagcaggcctctgggatgaacgagggcaaaactcctcacccc
agagtggacatcacggacctcattcgagagtccaacgagaaatatggtgaaatccgattt
gaggaagtagaaagcatgcgacgtcgcaacagactgtatgtcatccaaaccttggaaatc
acaactaagcagaatgtgctccgggtcgtctcccaagatgtgagcctcaaccctagaaac
ctggaagagctgtatgaattattcaagaaagaacattttctctcctgttactggaaaccg
aatagtcccgctctaaagcaccacgatgccagcctgccctacctggaccaatatcggatc
gactgccagcagttccgaaccttgtaccacctcttgagtccctgggcacactgtgccaac
cgagattccttggccctgtggaccttccggctgctggacgagaacgtggacggcctgatc
aacttcaaagaattctcatctgtttgggatgtcctgtatcatgggagcttcacccataag
ctgacaatgcttttcaaattgcacattcctccagcttttaccgaagtggaatctctcagc
cctttgaaagggactcaactctctaaagaagaactgatccatttcagtcaactaagcgtc
tcctctcccgaagacaaagacaacgcggatggcttgaagacaagtcctgagaaagggaaa
gggaaagtggacgtccaggcttacctgaagcagtggcaagacgagatccttaaaaaggaa
gaaagcattaaggatctgccccggatgaaccagtcccagttcatccacttctccaagacc
ttgtacaacctcttccacggggatcccgaagaagagctgctcttccgggcgatcgctacc
gttacgggcctcttgctgaggatggaagaggtgggccggaagctccagagccccacttcc
cccacccggagagggacatcccccacggggggtcctgcactggcctcctcccagagggac
gacccaggagccccggtctccgtccccgtcagtgagggctggtcgttcgcctttgagcag
atcctggcctccttgctgaacgaaccggccttggtgaggtttttcgagaaaccggtcgat
gccggagccaagttagaaagcgcgaaagcctctcagttgaaagcaaggcctgccctgtga
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integrated database retrieval system
