Thamnophis sirtalis (common garter snake): 106555474
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Entry
106555474 CDS
T06107
Symbol
PPFIBP2
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106555474 (PPFIBP2)
Membrane trafficking [BR:
tsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106555474 (PPFIBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
CENP-F_leu_zip
DUF16
LETM2_N
Motif
Other DBs
NCBI-GeneID:
106555474
NCBI-ProteinID:
XP_013929806
UniProt:
A0A6I9Z160
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MTSDASHMLEAALEQMDDIIAGTKAAAEYTNGVYDMVSPAQSVYFGSLQILHLLEDLKLA
LEMLKDPQEKEALWHQVPGATVACIHDWLEEHLSQVNHHTSTSNETYQERLTRLEGDKES
LILQVSVLTDQVEAQGEKIRDLEVCLEGHQLKLNATEEMLQQELLSRTLLETQKLDLMAE
VSDLKIKLVGMEKEQSEYEEKQNKAENLLQELKHLKIKVEELENERTQYEWKLKATKAEI
AQLQEQLALKDSEIERLQSQISRTSANNEIAEREEVYKRRLKEKYQEVQRLKVGMESLLV
ANQEKDRRIEELTVLLSQYRKVKEIMLAVQGTSERVLSASGEVDFEATLRKWNHMHAPQI
EYKTEIPQGDLAPPILLPASQKILEIRGSSPVPSNKLSLTNGETPEFQNRISQKKISSSL
EDLQSESLEKHVDGKPVERDLEEENKSHVKSSKYQTLPGKLPRAAHNEDNHLYNTPATPC
CINGNEDNSIQSLRAPDHMDNTTSEELSPLSSGTDSGAQSPLSPDNKRNPKGIKKIWGKI
RRTQSGNFPGDDLGLVEFRRGGLRATAGPRLSRSKDTKGPKSDHNAPFAQWDTERVCNWL
EEFGLGQYVIFARQWISSGHTLLTATPQDMEKELGIKQPLHRKKLVLAVKAINTKQDDKS
AQLDHIWVTRWLDDIGLPQYKDQFHESRVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCAI
HVLHLNNFNPHCLRRRPADENTISSSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGG
LIILEPRFNGDTLAMLLNIPPQKTLLRRHLTTNFNVLIGPEAQQDKREIVESTAYAALTT
TAKVRPKKLGFSHFGNLRKKKFDESTDYICPMDTSITNGTQRSYGTYRVHNALPDKELDK
LDQVGQGD
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgatgctagtcacatgcttgaagctgctctagaacaaatggatgatatcatt
gcaggcacgaaggcagctgcagaatatacaaatggtgtctatgacatggtgtcacctgct
caatcagtgtattttggctcacttcaaattttgcacctcttggaagatttgaaattagcg
ctggaaatgctcaaggatcctcaagagaaagaagctttgtggcaccaagtaccaggggct
acagtagcttgcatacatgactggctggaggaacatctgtcccaggtgaatcatcatact
tctaccagtaatgagacctatcaagaacgtctgacaagattggaaggtgataaagaatct
ctcatattgcaggtgagtgttctcacagaccaagttgaagcccaaggagaaaaaatccgg
gacttagaagtttgccttgaagggcaccagctgaagcttaatgctacagaagagatgctt
caacaggaactgttaagtcggacgctgctagaaactcagaaattagatttaatggcagaa
gtttcagatctgaaaatcaaactggttggaatggagaaagaacaaagcgaatatgaagag
aagcagaacaaggctgagaatttgttacaggaactcaaacacctgaaaattaaggttgaa
gagctagaaaatgaaaggactcaatatgaatggaaactgaaagcaactaaagctgaaata
gcacagcttcaagaacagctagctctaaaagactctgaaattgaacgattacagagtcaa
atctcgaggacgtcagcaaataatgaaattgcagagagagaggaagtgtataagagaagg
ctaaaagagaaataccaagaagtccagcgtttgaaagtaggaatggaatcactattggtt
gcaaatcaggaaaaggaccgccgcatagaagagttaaccgttttgctaagccagtaccga
aaagtgaaagagataatgctagcagtccaaggaacctcagaaagagttttgtctgccagt
ggtgaagttgattttgaagcaaccttaagaaaatggaaccacatgcacgcgcctcaaata
gaatataaaacagagatacctcaaggggacttggctccacctatattgcttcctgcatca
caaaaaatactggaaatcaggggaagctctccagttccctcaaataaactatctttgaca
aatggggaaactccggaatttcaaaacaggatctctcagaaaaaaatttcaagtagtcta
gaagacttgcaaagtgaatctctggaaaagcatgttgatgggaaaccagtagaacgtgat
ctagaagaagagaataaatctcatgtgaaaagcagcaagtaccaaaccttgccaggaaaa
cttcctcgagcagcacacaatgaagataaccacctgtacaatacacctgctactccatgt
tgtataaatggcaatgaggacaacagcatacagagcctgagagctcctgatcacatggac
aatacaacttcagaggaactttcacccttgtcatctggaacagattcaggtgcacagtct
ccattatctccagacaataaaagaaatccaaaaggaattaaaaaaatatggggaaagata
cgtcgaactcaatctggaaatttccctggagatgatctaggtttggttgaatttcgaaga
ggtggtctccgtgcaacagctggacctcgattatctcggtcaaaggacaccaagggtcca
aagagtgatcataatgccccatttgcccaatgggacactgaacgtgtttgcaactggctt
gaagagtttggccttggtcaatatgtcatttttgcaagacagtggatatcatctggccat
acacttctgacagcaacacctcaggatatggaaaaggagttgggaattaagcagccttta
cacaggaagaaattggttttggcagtcaaagctataaatacaaaacaagatgataagtct
gcgcagttagatcatatctgggttacacgatggcttgatgatattggtttaccccagtac
aaggatcagtttcatgaatcacgagttgatggcagaatgctgcaatatctaactgtgaat
gacctcctcttcctcaaggttacaagccagctgcatcacctcagcattaaatgtgccatt
cacgtgctacacctgaacaattttaacccacattgcttacgcagaagaccagcagacgag
aatactatctcatcatcagaagtagtacaatggtccaatcatagagtgatggaatggctc
agatcagtagatttggcagaatatgcaccaaatcttcgaggaagtggcgttcacggtgga
ctcatcatcctggagcctcgtttcaatggagatactctagcaatgctcctcaacattcca
cctcaaaagactctgctaagacgccacttgaccacaaatttcaatgtgctcatcgggcca
gaggctcagcaagataaaagggaaatcgtggaatctaccgcttatgcagctctcactacc
accgcaaaagtccggccaaagaaacttggattttcacattttggaaacttaagaaaaaag
aagtttgatgaatctacggattatatttgccctatggatacaagtataaccaatggcact
cagaggagttatggaacatacagagtgcataacgccctccctgacaaagaattagacaaa
ctggatcaggtgggccagggggactga
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