Thamnophis sirtalis (common garter snake): 106555559
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Entry
106555559 CDS
T06107
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106555559 (RAI1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106555559 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LETM1_RBD
Motif
Other DBs
NCBI-GeneID:
106555559
NCBI-ProteinID:
XP_013929907
UniProt:
A0A6I9Z020
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQPTSSQDSSRLENYRHQSPACERQRLVTKEYYSPQQPPPPLPP
LPYQAFGENSAVEKYHRGSNKPLRGQQLPSRPASFPNYSIQENSPYPSRYAGEDGLQGWV
SPQQQPPPQPLPGGVAKYEDNLMKKTATPSSSRQYHEQTPQLPFRSHALHLQQQPGPQPS
PLTYPKLPRQKMQNEVSSSLSFSQGSHFPQHSQSFSASSTYTSVQSGGQTAHSYKSCNPP
PAPPTHERGLGSAANLPAAQRVQGLHSYQPNRISYEQPPQQPPPPPPPPPPPPSLQGRHH
AQEALHYQSLAKYQHYNQPGQSYCQADAPVRTPDQYYQTFSPSSSHSPARSVGRSPSYSS
TPSPLMPNLENFQYSQQSLTAGTFPANLADHSHFMPLLNPSPTDGASSDAQPPANCKSLS
KEKIPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSTGMPQKKGIKNSPRTPEQLKG
QHCSPEGNNYPAEQAGTPHSDPLSTPQSVHAETQETDYLSGSEDQLERGFLYCSQSRSPA
RVNSNAKPKPESVSTCSVTSPDDMSTKSDDSFQSIHPSLPLESFTKFVSGERDCPRLLLS
ALSQEELASEIIGLQDAINEKADKGWANSPAPSKDPDKSPFHLENHRTCLDSVVKSPWSN
QGDSNALAEPLKLDKGLGRNNGKNFTEEVYDTSQVSFTTTETKNSLKTTSSVGYNAKPSI
SVATSSSETPGGFSCYSNATSNSVSSESAMENFEWPDENLSDTWKELGSSLQSSDLSKSL
FSGKLSETSEEKKNASCMSLCGPEGSNEGEGITGFGQQQQASKEEGLNYNEATRTESERW
LEDTARNSCSGEDFSELPMMSSPDLKESDLEPEEYSSLCELAGSEQKTLTYDAFTPKPAE
NAPVLSLQDTPGSAEEATNTVEKENTAPPSHLSDPSVLLLGPSVGTDTKVKSWFETSLHH
LESKEESAAGENVPQDKTETSTTLLLKKPVLPDKLTITSEPTSRGKSLRSKKLQCRLSSG
EELIQSMSNPCSGIQAAGLVANTCLAPNNLIEMPSKNTHGQTPRFPTEGLPARMCTRSFS
AMTEPRMPDPLEGAKASTPHEKLAGKKSMCVLKERVSFKARKANGKASPKLCNPSPPLIS
NLTQNEDSAVSKAKEGDIVETEMKDQQSMILRSRTRTQEVFYTKRRREKNMVEVDFKNAK
LPRKVFPNNLLPGSFRISSEKESKLGKQMKARPEMAGKISERPLHALKRKSVFLPPIPAK
KRNLIL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgcgaaaggtgtggtttccatggcaaccagcagaactaccagccgact
tcttcgcaagattcatcacgcctggagaattacaggcatcaaagcccagcctgcgaacgt
cagaggctggtgacaaaagagtattacagcccccagcagccgcctcctccgctgcccccg
ttgccgtaccaagcctttggtgaaaacagcgccgtggagaagtaccatcggggaagcaat
aagccgttacgcggccagcagctgcccagcaggccggcttccttccccaattactccatc
caagagaatagtccctacccttcacgctacgccggagaggacggcctgcagggatgggtg
tccccgcagcagcagccgcctccacagcctttacctggcggggtggccaagtacgaggat
aatctgatgaaaaagacggccaccccatcaagtagcaggcagtaccatgaacagacaccc
cagctgcccttccgaagccacgccttgcacctccagcagcagccgggaccccagccctct
cccctgacgtaccccaaactccccaggcagaagatgcaaaatgaggtgtcctcctcgctc
tccttctcgcagggatcccactttccgcagcattcccagtccttctcggcttcctccacg
tacacgtcggtccagagcggggggcagacagctcattcctacaaaagttgcaaccctccc
cctgccccacccacgcacgaaaggggtctgggcagtgccgctaacttgcccgccgcacaa
cgggtccagggtttacacagctaccagcccaaccgaatcagctacgagcagccgccacag
cagccaccgccgccgccgccgccaccaccacctccgccctctttgcaaggtagacaccat
gctcaggaggcactgcactatcaaagcctagcaaaataccaacattataaccagccagga
cagagttactgccaagctgacgctccggtgaggacaccggaccagtattaccaaacgttt
agccccagctcgagtcactctccagctcgttccgttgggaggtccccgtcgtatagttca
acgccttctccgttgatgcctaacttagagaacttccaatacagccagcagtccctgacc
gctgggacatttccagccaacctggctgaccatagccacttcatgcctttgctgaacccg
tcgccaaccgacggggcgagctctgacgcccagccacctgccaactgcaagagcctgtca
aaggagaagatccccgagaacctcttatcggatctgagtctccaaagcctgacagccctt
acctctcaagtggaaaacatctccaacactgtccagcagcttctcctttccaagtccacg
gggatgccacagaagaaggggatcaaaaattcacccaggaccccagagcaactcaaggga
cagcactgcagccccgagggcaacaattatcctgcagagcaagcggggactccacactct
gaccccctcagcaccccgcagtcggtccacgctgaaacccaagagaccgattacctgagt
ggctccgaagaccagctggagaggggcttcctgtactgcagtcaaagccgtagcccagct
cgggtcaacagcaatgccaaacccaagcccgaatctgtgtccacctgctcggtgacgtct
ccggatgacatgtcgaccaagtccgatgattccttccaaagcattcaccccagcctgccc
ttggagagctttacgaagtttgtgtctggtgaaagagactgcccccggttgctcctcagt
gctctctctcaggaggagctggcctctgaaattattggtcttcaggatgctattaacgag
aaagcagacaaaggctgggccaactcccctgctccaagcaaagacccagacaaatctcct
ttccacttggagaaccacaggacttgccttgactctgtggtcaaaagcccctggtccaac
cagggggactccaacgctcttgctgagcccctgaagttagacaaaggactggggcgtaac
aatgggaaaaacttcactgaggaggtttatgacacctcccaggtttccttcaccacaacc
gagacgaagaattccctcaaaaccaccagctccgtaggctacaatgccaagccgagcatc
tcggtggccacctccagttcggagacccctggaggcttcagctgctattccaacgccact
tccaactcagtcagttccgaaagtgccatggagaactttgagtggccagatgagaacctc
agcgacacctggaaagagctcggctcaagccttcaatcctcagatctttccaagagtttg
ttctctggcaaactgagcgagacctctgaggagaaaaaaaatgcttcctgcatgagtctc
tgtggtcccgaagggtccaatgaaggcgagggaatcacgggcttcggtcaacagcagcag
gccagcaaagaagaaggcttaaattacaacgaggccacgaggacagagagcgagcgatgg
ctggaggacactgccaggaactcctgttcgggagaagatttcagcgaactccccatgatg
tcttctccagatttgaaagaatctgatttggaacctgaagaatattcctctttgtgtgag
ttagctggctctgagcaaaagacattgacttacgatgccttcacccctaagcctgcagag
aacgctccggttctttctctccaagataccccaggatcagcggaagaagccaccaacacc
gttgagaaagagaacaccgctcctccttctcatttgtctgatccatccgttctccttttg
ggaccctcagttggcacagacaccaaagtgaaaagctggttcgaaacttctctgcatcac
ttggagtccaaggaagagtcagcagctggtgaaaacgtccctcaagataagaccgagacg
tcaactactttgctgttgaagaaaccagtcctaccagacaagttgaccataacctcagaa
cccacctctagaggtaaaagtcttcggagtaaaaagctgcagtgtaggctgtcgagtgga
gaggaacttattcaatccatgtcaaatccatgttcaggtattcaagcagctggccttgtg
gccaatacatgcttggctcccaacaacttgattgaaatgcccagtaagaacacgcatggc
cagactcccaggttccccacggagggcttgccggccagaatgtgtacccgttccttttct
gcaatgaccgagccacgaatgccagaccctctggaaggtgccaaagcttcaactcctcac
gagaagttggcgggcaagaagtccatgtgtgttttgaaagagagagtgtccttcaaagct
aggaaggccaatgggaaggcgtcgccaaagctctgcaatccgtctcctcccctgatctcc
aacttgacccagaatgaagactctgctgtctccaaggccaaagaaggcgacattgtagaa
accgagatgaaagatcaacaatccatgattctccgttccaggacccggactcaggaggtc
ttctacaccaagcgaaggagagagaaaaacatggtggaagtggacttcaaaaacgccaaa
ctgccccggaaggtcttccccaacaaccttctgccggggtctttcaggatcagctctgag
aaggagagcaagctgggcaagcagatgaaagctaggccagaaatggccggcaagatctcc
gagaggccgctccacgccttgaaaagaaagtctgttttcctgcccccgattccggcgaag
aaacggaacctgatcctc
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