Thamnophis sirtalis (common garter snake): 106555642
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Entry
106555642 CDS
T06107
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106555642 (WDTC1)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106555642 (WDTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
TPR_19
TPR_17
TPR_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
TPR_11
TPR_1
ANAPC3
Beta-prop_RIG_2nd
Beta-prop_HPS5
TPR_14
TPR_16
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
TPR_6
Beta-prop_SPT8
Beta-prop_IFT122_1st
TPR_9
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Barstar
Motif
Other DBs
NCBI-GeneID:
106555642
NCBI-ProteinID:
XP_013930004
UniProt:
A0A6I9Z129
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDLNSAGMLGFTATPSLTCFRRPYCEKMAKANIIGDLISRQLKEKGALSFERHYHVTDPF
IQRLGLEAELQGHAGCVNCLEWNEKGNLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI
FSVKFLPHTEDRILITGAADSKVHVHDLTVKETIHMFGDHKNRVKRIATAPMWPNTFWSA
AEDGLIRQYDLRENSKHSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRIYD
IRMIHNHRKSMKQNPAAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATY
VTFSPDGTELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSANGMSNGIH
LHSNGFRLSEGRALVSPQVELPPYLEKIKLQANEAFACQQWTQAIQLYSRAVQKAPNNAM
LYGNRAAAYMKRKWDGDHYDALRDCLRAISLNPCHLKAHFRLARCLFELKYVAEALECLD
DFKGKFPEQAHSSACDALDRDINAALFSKSDNGEDKKGSGPIWLRATGRKDSISEDEMVL
RERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIISGSDDGSFFIWEKETTNLVRVLQGD
ESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESEALNGRVVEDMEGASQANQRRMNADP
LEVMLMNMGYRITGMTGGGSGGSDDEDSSENQVHCRTS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaactctgctggaatgcttggattcacagcaacaccatcactaacttgcttt
cggaggccctattgtgaaaagatggcaaaggcaaatattattggagacctcattagcagg
cagctcaaggaaaagggtgccctcagttttgagcgacactatcatgttactgacccattc
attcagcgtctgggcttggaagcggagctgcaaggtcatgctggctgtgtcaactgcctt
gaatggaatgaaaagggaaatttgctggcctctggctctgatgaccagcacaccattgtg
tgggatcctctgcaccataagaaactcctttccatgcacacggggcacacggcaaacata
ttctctgtcaagttcctgccacatacagaggaccggatacttattactggagccgcagat
tccaaagtgcacgtccatgacttaactgtcaaagaaacgatccacatgtttggggatcac
aaaaacagagtcaagcgaattgccacagctccgatgtggcccaacaccttctggagtgcg
gcagaagacgggctaatcagacagtatgacttgcgagagaatagcaaacactcagaagtt
ctgatagacctgactgaatactgtgggcagcttgtggaggcaaagtgtctcacagtcaat
ccccaggacaataactatctcgccgtgggggccagtgggccctttgtccggatttatgac
atacgtatgatccacaaccacaggaaaagcatgaaacagaaccccgcggctggcgtccat
acattctgtgatcgacagaaacccctcccagatggagctgctcaatattacgtagcaggg
catcttccagtgaaattacccgactacaataatcgactgagagttttggtagctacctat
gtgactttcagcccagatggtacagagctcttggtcaacatgggaggagaacaggtttac
ttattcgacctgacgtataagcagcggccatacacttttctcctgcccaaaaaatgccat
acttcaggggaggtgcagaatgggaaaacatcggccaatggcatgtcaaacggcatccat
ctccacagcaatgggttccggctgtctgagggacgagccctcgtcagcccacaggtagag
ctacctccctatctcgagaagattaagctgcaggccaatgaggcttttgcttgccagcag
tggactcaagccatccagctctacagcagagctgtccagaaagcccccaacaacgcaatg
ctctatgggaaccgagcggctgcttacatgaagcgcaagtgggatggagatcattatgat
gcgctccgagactgcctgagggccatctccctgaatccttgccacttgaaggctcacttc
cgcctggcccgctgcctcttcgagctgaagtatgtagcagaagccctggagtgtctggat
gatttcaaaggaaagtttcctgagcaagcccacagcagtgcttgcgatgccctggaccgg
gacatcaatgctgcccttttctccaaaagcgataatggcgaagacaagaaagggagtggc
cccatctggctgcgagcaactggccgcaaggattccatatcggaggacgaaatggtgctg
agggagcgcagctacgattacaaattcagatactgcggccactgcaacaccaccacagac
atcaaagaggcgaacttcttcggcagcaatgcgcagtacatcatcagtggctccgatgat
ggttccttctttatctgggagaaagaaacaactaatctggttcgagtgctgcagggcgat
gagtcgattgtgaactgcctccagcctcacccgagctactgcttcctggctaccagtggc
attgatcccgtggtacggctttggaatcccaggccagaaagcgaagcactgaacgggcga
gtggtagaagatatggaaggcgcttcccaagccaaccagaggcggatgaatgctgatccc
ttggaggtgatgttgatgaacatgggctacaggatcacaggaatgactggtggtgggtct
ggaggctcggatgacgaagacagctctgagaatcaggtccactgccggaccagctaa
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