Thamnophis sirtalis (common garter snake): 106555660
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Entry
106555660 CDS
T06107
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106555660 (SOX3)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106555660 (SOX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106555660
NCBI-ProteinID:
XP_013930025
UniProt:
A0A6I9Z2C8
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MYSLLENELKPPQGAGAGGGGGGGTNAAVPDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYA
LPGNLLAPSGGPGGGGGGGAGGGVSSPVGVGQRLDSYAHVNGWPNGAYAAASLMPEQLGY
GQHPAMGNAQLQSLHRYDVSGLQYSPIMSSGQSYMTAAASTYSMAAAAAAYGQQPSSHAM
SLGTMASVVKAEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADPSSLQSGRLHGV
HQHYHNAAGAAVNGTVPLTHI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcctgctggagaacgaactgaagccgccccagggagcaggagcgggaggcggc
ggcggcggcgggaccaacgcggctgtcccagaccaggaccgggtcaaacgtcccatgaac
gccttcatggtgtggtcgcgggggcagcgccgcaagatggcccaggagaaccccaaaatg
cacaactcggagatctccaagcgcctgggcgccgactggaagctgctgagcgacgccgag
aaacggcccttcatcgacgaggccaaacgcttgcgcgccgtccacatgaaggagtatccg
gattataagtaccggccccgtcgtaagaccaagacgctgctgaagaaggacaagtacgcg
ctgccgggcaacttgttggccccgagcgggggtcccggcggaggcggaggcggcggggca
ggcggcggggtgagtagcccggtgggcgtcgggcagcgcctggactcgtacgcgcacgtc
aatggctggcccaacggtgcctacgcggcggcttcgctgatgcccgagcagctgggctac
gggcagcacccggccatgggcaacgcgcagctccagtcgctccaccgttacgacgtcagc
ggcctccagtacagccccatcatgtcgagcggccagtcctacatgacggcggccgcttcc
acctacagcatggccgccgccgccgccgcttatggccagcagccgtcgagccacgccatg
agcttggggactatggcctcggtggttaaagccgagcccagctcgccgccgccggccatc
gcgtcgcactcccagcgggcctgcctgggggacctccgcgatatgatcagcatgtacctg
ccgcccggcggagacgccgccgacccgtcgagcctgcaaagcgggcgcctccacggcgtc
caccagcactatcacaacgccgccggggcggccgtcaacggcaccgtcccactgactcat
atctga
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integrated database retrieval system
