Thamnophis sirtalis (common garter snake): 106555758
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Entry
106555758 CDS
T06107
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106555758
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106555758
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
106555758
NCBI-ProteinID:
XP_013930136
UniProt:
A0A6I9Z286
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
VELTGSSIFDYVHPGDHLEVELTGSSIFDYVHPGDHLEVADQLGLKAPLGPGHPHRPKAP
LLGSSASSEGPQITDYMDLSPSELVGKSCYRFIHGEDVEGIQQSHLDLLNKGQVVTRYYR
WLQKNGGFVWVQSCATISVNVKNPSERNMVWVNYILSKPECKNVALDVFQVPGIPARQTE
APSAGSDFKESDRGKPPCPAAKPPGTLAQSYPRSVAEMGRHCHLVESKPSAPETKYPPEE
EASEDGAGSDAETPPRKRIKLEFPPESPPSKGKEQTPLSSSEDSDSSSDSEPEMVPQQTG
ALARKVNGCKTGGRKTMVPARPCTSEFTSVIQTQKGASLRSNPALSIKSEQVPQAKVGLW
TCPGAKGSPANKSLRLEKPLVRQASSHLYVSIPDSVLTPPEVDNGLAKGPFGASPRAAPS
SSGDTLSPPLSGSPCEDRGSATPFTPLIYPTEMDVLQRFHSSNVVVPLMHQLGNPHPGSP
AGSPGLYATSTIRYAPADMTLAMPSNMLPPSHHPLSLMDISSAEAKTSREIMYHHLQRLN
MVAPFGNSASLAQISGGAFAAADSLFSTLPFSVASGGIHSGSALERKED
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgaccggcagcagcatcttcgactacgtccatcctggagaccatctagaagtg
gagctgaccggcagcagcatcttcgactacgtccatcctggagaccatctagaagtggcc
gatcagctggggctgaaggctcccctgggtcccggccacccccaccgccccaaagccccc
ctcctgggctcttctgcctcgtccgagggtcctcagatcaccgactacatggacttaagt
ccctcggaactcgtggggaagagctgctatcgattcatccatggagaagacgtggaaggc
atccagcagagccacctcgacttgttgaacaaggggcaggtggtcacccgctattaccgc
tggctgcagaagaacgggggcttcgtctgggtccagtcctgcgccaccatctcggtcaac
gtcaagaatccctccgaaaggaacatggtgtgggtgaactacatcctcagcaagccagaa
tgcaagaacgtcgctctggatgttttccaggttcctggcatccccgccagacaaacggaa
gcccccagcgcagggtcggacttcaaagagagtgaccgggggaagcccccgtgcccagct
gccaaacccccagggaccctggcccagtcctaccccaggagcgtggccgaaatggggcgg
cactgccacctggtggagagcaagcccagtgctcctgaaacgaaataccccccagaagag
gaagcatcggaggacggtgccggcagcgatgcagagacccctccgaggaagaggatcaag
ctggagttccctccggagagccccccatccaaggggaaggagcagactccgctgtccagc
tccgaggactccgacagcagcagcgattcagagccggagatggtcccccagcagacgggg
gccttggccaggaaggtgaacggctgcaagaccggcggacggaaaaccatggtccccgcc
cgtccctgcacgtcagagttcacctccgtcatccagacccaaaagggcgcctccctcaga
tccaacccggccctcagcatcaaatcggagcaggtcccccaggccaaagtggggctctgg
acctgtccgggggcgaagggcagccccgcgaacaaatccctccgcctggagaagcccctc
gtgagacaggcgtcctcccatttgtacgtctccatccccgactcggtgctcaccccgccc
gaggtggacaacggcctggccaaggggcccttcggcgcctctccccgggcggccccgtct
tcctcgggggacacgctctcgcctccgctctcgggctccccctgcgaggaccggggcagc
gccacgcctttcaccccgctgatctacccgacggagatggacgtcctccagaggttccac
tcgagcaacgtggtcgtccctttgatgcatcagctcggcaatccgcaccccggctccccg
gccggctccccgggactctacgccacgagcaccattcgctacgcccccgcggacatgacc
ctggccatgcccagcaacatgctgccgccttcgcaccacccgctcagcctgatggacatc
agcagtgccgaggccaagacctctcgggagatcatgtaccaccacctgcagcggctcaac
atggtggccccgtttgggaactcggctagcttggcccagatttccggcggggcctttgcg
gccgctgactctttgttttccaccctgcccttctccgtggccagtggggggatccacagc
gggtcagctctggagcgcaaggaggattaa
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