KEGG   Thamnophis sirtalis (common garter snake): 106555927
Entry
106555927         CDS       T06107                                 
Symbol
CETN2
Name
(RefSeq) centrin-2
  KO
K10840  centrin-2
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    106555927 (CETN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsr03019]
    106555927 (CETN2)
   03036 Chromosome and associated proteins [BR:tsr03036]
    106555927 (CETN2)
   03400 DNA repair and recombination proteins [BR:tsr03400]
    106555927 (CETN2)
Messenger RNA biogenesis [BR:tsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     106555927 (CETN2)
Chromosome and associated proteins [BR:tsr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    106555927 (CETN2)
   Centrosome duplication proteins
    Centriole replication proteins
     106555927 (CETN2)
DNA repair and recombination proteins [BR:tsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      106555927 (CETN2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EH EF_EFCAB10_C EF-hand_14 Dockerin_1 SUB1_ProdP9 SurA_N_3 SRI DUF7645 SurA_N_2 LETM1_RBD Nop5_N MJ1010-like_2nd
Other DBs
NCBI-GeneID: 106555927
NCBI-ProteinID: XP_013930342
UniProt: A0A6I9Z178
LinkDB
Position
Unknown
AA seq 171 aa
MASSYKKTSLGAAAQRKKTASKTELTEEQKQEIREAFDLFDTDGTGNIDVKELKVAMRAL
GFEPKKDEVKKMILEIDKGTGKITFSDFLGVMTQKMAEKDSKEEILKAFKLFDDDETGKI
SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcctccagctataagaagacgtccctgggagcagcagctcagaggaagaaaacagct
tccaaaaccgagctcaccgaagagcagaagcaagagattcgggaggcctttgatctcttt
gacaccgatgggactggcaatattgatgtaaaagagttgaaggtcgccatgagggccctt
gggtttgagcccaagaaagacgaggtcaagaaaatgattcttgagattgataagggaaca
ggaaagattaccttcagtgacttcctaggagtgatgacccagaaaatggctgaaaaagat
tcaaaagaagaaattctgaaagcttttaagctcttcgatgatgatgaaacaggcaaaatc
tctttcaaaaaccttaaacgtgtggccaaagaactgggcgagaatctcaccgatgaggag
cttcaggagatgattgatgaagccgatcgggacggagatggggaagtcaatgaacaggag
tttctgcggatcatgaagaaaactagtttgtactga

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