Thamnophis sirtalis (common garter snake): 106555969
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Entry
106555969 CDS
T06107
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106555969 (SOX2)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106555969 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106555969
NCBI-ProteinID:
XP_013930390
UniProt:
A0A6I9Z3F7
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MYNMMESELKPPAPQATPGGGTGGNSNAGGANSQKNSPDRVKRPMNAFMVWSRGQRRKMA
QENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLM
KKDKYTLPGGLLAPGSNSMGTGVGVGAPLGAAGVNQRMDSYAHMNGWTNGGYGMMQEQLG
YPQHPGLNAHNAAAAAAAAAQMQPMHRYDVSALQYNSMAGSQTYMNGSPTYSTMSYTQQA
TPGMGLSSMGSGVKTESSSSPPVVTSSSHSRAPCQGGDLRDMISMYLPGADVAEPAAPSR
LHMSQHYQNAPVPGAAINGTLPLSHM
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaagcgagctgaagcctcccgccccccaggcgactccgggggga
ggcacgggggggaacagcaacgccgggggggccaacagccagaagaacagccccgaccgg
gtcaagagacccatgaacgctttcatggtctggtcccgaggccaacggaggaagatggcc
caggagaaccccaagatgcacaactcggagatcagcaagcgcctgggggccgagtggaaa
cttttatccgaggcggagaagagacccttcatcgacgaggccaagcggctgcgcgccttg
cacatgaaggaacacccggattataaatacaggccccggcggaaaaccaagactttgatg
aagaaggataagtacacgcttcccggcgggctgctggccccgggctccaactccatgggc
acgggagtcggcgtgggggctccgctgggtgcggccggcgtcaaccagcggatggacagc
tacgcgcacatgaacggctggaccaacggcggctacggcatgatgcaggagcagctcggc
tacccgcagcacccggggctcaatgcccacaacgcggccgccgccgccgccgccgccgcc
cagatgcagcccatgcaccgttacgacgtcagcgccctgcagtacaactccatggccggc
tcgcagacgtacatgaacggctcgcccacctacagcaccatgtcctacacgcagcaagcc
accccgggcatggggctgagctccatgggctcgggggtcaagacggagtccagctccagc
ccgcccgtggtcacgtcctcttcccactccagagccccctgtcaaggcggagacctccgg
gatatgatcagcatgtacctgcccggagccgacgtcgcggagccggccgcccccagcaga
ctgcacatgtcgcagcattaccagaacgcacctgtgccaggagcggcgataaacggcacg
ctgcctctgtcccacatgtaa
DBGET
integrated database retrieval system
