Thamnophis sirtalis (common garter snake): 106556003
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Entry
106556003 CDS
T06107
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106556003
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106556003
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106556003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
Motif
Other DBs
NCBI-GeneID:
106556003
NCBI-ProteinID:
XP_013930426
UniProt:
A0A6I9Z374
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MDLHRAAFKMENSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVDKDVHI
PFTNGSYTFASMYHRQGGVPGAFTNRDFPPSLLHLHPQFAPPNLDCTPISMLNHSGVGAF
RPFASTEDRESYQSAFTPAKRLKNCHDTDSPHLRFSDADGKEYEFGAQLPSGSPGSLKID
DTGKKIFAVSGLISDRETSSSPEDRNDRYRSDSQGGPPVSVGASQRMALTFPLCKKKATL
FDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNALLKDVMTPGTPKSILLSASI
KREGDSPTVSPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQREGSCML
EDDPVDIENENGNRFEEYEWCGQKRIRATTLLEGGFRGSGFVMCSGKENPDSDADLDVDG
DDTLEYGKPQYTEADIIPCTGEEPGEAKEREALRGAVLNGGTPSTRI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggacttacaccgggcagctttcaagatggaaaactcctcctaccttcccaatcctttg
gcatctccagccctgatggtcctggcttccactgctgaagccagccgtgatgcttccatc
ccctgccaacagcccaggccctttggggtccctgtgtcagtggacaaggatgtgcacatc
ccgttcaccaatggctcctatacttttgcctctatgtatcaccgacaaggtggggtgcct
ggagcattcaccaaccgtgattttccaccttcgttgctgcatctccatcctcagtttgca
ccccctaatctggactgtaccccaatcagcatgctgaaccacagtggtgttggggccttc
cgtccctttgcctccactgaggaccgggagagttatcagtcggcttttacacctgccaag
cgcctcaagaactgtcatgataccgactctccccatctacgcttctcagatgctgatggc
aaggagtatgaatttggagcccaactcccatctggctctcccggctccctcaaaattgat
gatactggaaaaaagatttttgctgtctctggcctcatttcagacagagagacttcctcc
agtcctgaggaccgaaatgatagatatagaagcgacagccaaggagggccaccagtgtcc
gtgggggccagccagcgcatggcgttaactttccccctctgcaagaagaaggcaacactc
tttgacagccaggctcctatctgccctatttgtcaggttttgcttcgcccaggtgagctg
caggagcatatggagcaggagctggagaagttaacacagctgaatatcagtaagaatgct
ttactgaaggatgtcatgacgccaggcactcccaagtcgattttgttgtcagcctctatc
aagcgggaaggagattctccaacagtatcaccccattcctcagatgatattcatcactct
gacagataccagacttttttgcgagtaagggcaaacagacagacccggctgaatgctcgg
attggaaaaatgaaaaggaggaagcaagacgaagggcagagggaggggtcatgcatgttg
gaggatgaccctgttgacattgagaatgagaatggtaatcgctttgaggaatatgaatgg
tgcgggcagaagagaatacgtgctaccaccctcctggaagggggcttcagaggatctggg
tttgtcatgtgcagtggcaaagagaatccggacagtgatgctgaccttgatgtggatggt
gatgacacattggaatatggaaaaccacaatacactgaagcagatatcattccatgcact
ggggaagaaccaggtgaagccaaagagagagaggcactccgaggtgcagtcctaaatggt
ggcactcctagtacccgaata
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