Thamnophis sirtalis (common garter snake): 106556004
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Entry
106556004 CDS
T06107
Symbol
LEF1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04310
Wnt signaling pathway
tsr04520
Adherens junction
tsr04916
Melanogenesis
tsr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106556004 (LEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106556004 (LEF1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
106556004 (LEF1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106556004 (LEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106556004 (LEF1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
106556004 (LEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106556004
NCBI-ProteinID:
XP_013930427
UniProt:
A0A6I9Z1F0
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MPQLSGGGGDPELCATDEMIPFKDEGDPQKETIFAEISHPEEEGDLADIKSSLVNESETI
PSSNGHEVSRQGQSQEVYEKSREHPEEGKHIDGVLYNKGPYSGYSGYIMMPNMNNDPYMS
NGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGTHPSHLPSDVNTKQGMNRH
PPGPDISTFYPLSPGSVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHT
DSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGR
RWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESTSGIFMGTA
PRMTAAYI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctctcgggaggcggcggcgatccggagctctgtgccaccgacgagatgatc
cccttcaaagacgaaggtgacccccaaaaggaaaccatcttcgccgagatcagccacccg
gaggaagaaggagacctggccgacatcaagtcttcgctggtcaacgagtcggaaaccatc
cccagcagcaacgggcacgaggtgtctagacaaggccagtctcaggaagtttatgaaaaa
agcagagaacatcctgaagaaggcaaacacatagatggtgttctgtacaataaaggacct
tattctggttattccgggtatatcatgatgccaaatatgaataatgacccatatatgtct
aatggatctctctcgccaccaattcctagaacatctaacaaagtccctgtggtgcaacct
tcccatgcagtccaccctctcactccactcatcacctacagcgatgaacacttttctcca
gggacacatccttcacacctcccctcagacgtcaacacaaaacaaggcatgaatcggcat
cctccaggtcctgatatttccaccttttatcccttatcgcctggcagtgttgggcagata
accccaccacttggctggttttcacatcatatgatcccaggtcctccaggaccccacaca
actggaatccctcatcctgcaattgtaacacctcaagtcaaacaagaacatccacacaca
gacagtgacttaatgcacgtgaagcctcagcatgaacagaggaaagaacaagagcccaaa
agacctcacattaagaaacctctgaacgctttcatgttatacatgaaagagatgagagcg
aatgttgtagcagaatgtactctgaaagaaagtgcagccatcaaccagatcctcggcaga
aggtggcatgccttgtcgcgtgaagaacaagcaaaatattacgaactcgctcggaaagaa
aggcagctacacatgcaactgtatcctggctggtctgcaagagacaactacggaaagaag
aaaaagaggaagagagagaagctacaggagtcaacatcaggtatatttatgggtaccgcc
ccacgaatgacagctgcctacatctga
DBGET
integrated database retrieval system
