Thamnophis sirtalis (common garter snake): 106556029
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Entry
106556029 CDS
T06107
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tsr04054
]
106556029
Pattern recognition receptors [BR:
tsr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
106556029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_14
LRR_9
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
106556029
NCBI-ProteinID:
XP_013930458
UniProt:
A0A6I9Z0E2
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MSQMNFVHLFLVFVLINPQRVTAYGFRNCIQAMKNPLYFKCMQRFLNNISSIVDDLPNNA
QVINASHNAIKVLPYGSFRHLPQLEILQLSYNKMEKIEGGAFENLRALRKLNLSCNYLTN
LSNGTFLGLANLTLLLLHNNHLNVIHQKAFSPLRSLLDLQLQFNILSSFNVVIQSVQKLN
GLKYLNLCNNNLSFLQPGVGFPPSLYNLKLCNNSLRKMEGPGPRFLGNVTVLDLSYNKFS
DVSSFANVSLQRLQRLKLMGNKIDVLQLLDTSNLKPRSLDYSGLQLNNVSQLTKVCQRLG
KSSRPFSLHLQSNNLKYVSGQAFLACPPIQLLDLSRNRLRSVGCVREMLNATAQSRLNKL
VVEHNLLKHLRVCFNTAPFEELTAISFRFNRILSISSSAFHYAPNLTTLHLNINSIAFLH
PKALKGLRQLRELRLDNNLLTDIYNDSFSDLSNLQTLNLRNNHVSVLFPGTFKSLGELSI
LDLGGNNIHRLANMSFEGLRSLSKLYLDNNNIQYIIPSFFHPIERTLQVLDLMGNKIYFI
SKHELKQPPFLNLGRVYDLKLQSQQPHGLKVIPSKFLKGLTSLRNLYLSENKILSIAPDV
FDDLRQLEYLTLADTSNGMGDFPPGIFKNLKNLTTLDLENAGLRTLTLEVFGNLSNLRSL
LLGKNELHTFNSSVANALPSLNYLDLRKCPLACTCDNMWFQNWLINSLVQVVYLYNYSCN
SGQHSSYVYSFDTHVCFQDIGLYLFSATLPFLLLWMLLPFLYDRSYWHIKYHIYILRAWV
NDHWRRGKDEHYKFDAFVSYNSADESWVLEQLVPSLEKAGAPTFRLCLHHRDFQPGRYVI
DNIVDSIHNSRHTICIISRRYLQSEWCSMEIQLASYRLFDELKDVLIPVILEAIPERELS
VYHRMRKVMLKKTYIAWSPDPEAQRLFWAKLRTALKTSNSEDKEEKLTDWFDQGDTPDTS
LLQA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaatgaacttcgtccatcttttcctggtttttgttctcatcaaccctcagagg
gtgactgcttacggcttccgaaattgcatccaagccatgaagaatcctttatatttcaaa
tgcatgcagcgtttcctgaacaatatctccagtattgtggatgacctccctaataatgcc
caagtgatcaatgcatcccataacgccattaaagtcttgccttatgggagcttccgtcac
ctccctcaactggagatcctacagttgagctacaacaaaatggagaaaatagaagggggc
gcctttgagaacctaagggccttgaggaaactcaacctctcctgtaactatctcacaaat
ctttccaatggcactttccttggcttggcgaacctcaccctcctcctcctgcacaacaat
cacttgaacgtgattcatcagaaggcctttagtccgttacgaagccttctggatttgcag
ctccagttcaacatcttgagcagctttaatgttgtgattcagagcgtacagaaattgaac
gggctgaagtatctcaacctttgcaacaataacctgagtttccttcagccgggagtggga
tttccaccttctttgtataaccttaaactctgcaacaattctcttcgtaagatggagggt
ccgggcccgagattcctggggaacgtcacagtgctggacctctcttataacaagttctca
gacgtctcatcttttgcaaatgttagtcttcaaagactccaaagattaaagttgatgggg
aacaagattgatgttctccagctcttggatacgtctaacctgaagcctcgcagcctggat
tactctggattgcaattaaataacgtttcgcaactgaccaaggtgtgccagcgtcttggg
aaatccagccgtcccttcagcctccacctgcagagcaataacctgaagtacgtaagtggc
caagctttcctcgcttgccctcccatccagcttctggatctttcgaggaatcgcctcaga
tcggtgggctgcgtgagggaaatgttgaacgccacggcgcagagccgtttgaataagttg
gtggtggagcacaatttgctgaaacacctgcgggtttgctttaacacggctcccttcgaa
gagctgacggccatttctttccgtttcaatcgcatcctctcgatcagcagctcagctttc
cactacgcccctaatttgaccaccctccatttgaacatcaactccatcgccttcctgcac
ccaaaagccctgaaaggcttgaggcaactccgagagctgcgcttggacaacaaccttctg
acggacatctacaacgacagcttcagtgacctgagcaacctccaaacgctcaacctcagg
aacaaccacgtttctgtcctcttccctggcaccttcaagagtctcggggagctgtctatt
ttagacctggggggaaacaatattcacaggctggccaacatgtccttcgaagggctgagg
agtctttccaaactctacctggacaacaacaacatccagtacattatccccagttttttc
catccgatcgagaggactctccaagtgctggacctgatggggaataagatatacttcatc
agcaagcatgagctcaagcaacccccctttttgaacctgggcagagtctacgacctcaaa
cttcaatcccagcagccccatggcttgaaagtcatcccctccaagttcctcaagggcctg
acctctttgcgcaatctctacctgtcggagaacaaaattctgtccatcgccccggatgtc
ttcgatgacttaaggcagctggaatatctaaccttggccgataccagcaacggcatgggg
gatttcccccccgggatattcaagaaccttaagaatctgacaactctcgatctggagaac
gccgggcttcgcaccttgaccctcgaggtatttggcaacctcagcaacctgcgctccctt
ctgttagggaagaacgagctacatacgttcaacagcagcgtggcgaacgctctcccgtcg
ctcaactaccttgacctacgcaagtgcccgttggcgtgtacctgtgacaatatgtggttc
cagaattggctgatcaatagtttggtgcaagtggtgtacctctataactattcttgcaat
tctggacagcactccagttacgtttatagctttgatacccatgtctgcttccaagatatt
gggctgtacctcttctccgcaaccctcccgtttttgctgctctggatgctgttgcctttc
ctttatgatcgcagctactggcacataaaatatcacatctacatcttgcgtgcttgggtc
aacgatcactggaggcgcggcaaagatgagcattacaagttcgacgccttcgtctcctac
aactcggcggacgagagctgggtgctagaacagttggtgcccagtctagagaaagcggga
gctcccaccttccggctttgccttcatcaccgagactttcagcccgggagatacgtcata
gacaatatagtagacagcatccacaatagccgacacactatttgtatcatcagtaggagg
tatctgcagagcgaatggtgctccatggagattcagcttgccagctaccggcttttcgac
gaattaaaagacgtccttattcctgttatcctagaagccatccccgagagggagctgtct
gtctatcatcggatgcggaaagtgatgctgaagaagacgtacattgcatggtccccggat
cccgaggcccagaggttgttctgggctaagttgaggacggctctgaagaccagtaactct
gaggacaaagaggagaaattgactgactggtttgatcaaggagacacgccagatacgagc
ttgctgcaagcctga
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