Thamnophis sirtalis (common garter snake): 106556264
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Entry
106556264 CDS
T06107
Symbol
LRFN2
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106556264 (LRFN2)
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106556264 (LRFN2)
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
SALM family
106556264 (LRFN2)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106556264 (LRFN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
Ig_3
LRR_4
ig
fn3
LRR_9
Ig_2
Ig_C17orf99
Kre9_KNH
LRRCT
H_PPase
Motif
Other DBs
NCBI-GeneID:
106556264
NCBI-ProteinID:
XP_013930730
UniProt:
A0A6I9Z4F0
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MEKLFCSILVFGVVVAVHACPKYCVCQNLSESLGTLCPSKGLLFVPPNIDRRTVELRLGG
NFIINISRQDFANMTGLVDLTLSRNTISYIQPYSFVDLESLRSLHLDSNRLPEIGEDILR
GLINLQHLILNNNQLNYISDDAFEEFLFTLEDLDLSYNNLKSIPWESIMKMINLHQISLD
HNLIDYITEGTFADLQKLARVDLTSNRLQKLPPDPIFARSQISPLTTTPFSPPLSLSFGG
NPLHCNCELLWLRRLDRDDDMETCASPPGLKGRYFWYVREEEFVCEPPLITQHTHKFVVL
EGQTATLKCKAIGDPSPIIHWVAPDDRLMGNSSRTIVYDNGTLEILITTSKDLGVFTCIA
ANAAGESTATIELSIVQLPHLSNGTGRTAPPKSRLSDITSSSKSNRGESKGPPDRAVLVS
EVTTSSALVKWTVSKSAPRVKMYQLQYNCSDDEVLIYRMIPATNKAFVVNNLVSGTGYDL
CVLALWDDTATTLTATNIVGCAQFYTKEDYPQCQSMHSQFLGGTMILIIGGIIVATLLVF
IIILMVRYKICNNNPGKMANVSNVYSQTNGSQPVQNGVLPQVNPKVVVKNELMEFNCESA
HSSISSSSSSMNSRDCDGYSLQSEQGTLSSKWRPPSRSKHHNIDRLMGAFASLDLKCQKK
EETIDSRTSIVVRHSDKEPLLGQQESKFRSLLMLPLEGKTKRSHSFDMGDFSTSQCYNYP
KKITNIWTKRSLSVNGMLLQYNDSDLTESKGTYGSSEWVMESTV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgttctgcagcattctggtgtttggagtggttgttgcagtccatgcctgt
ccaaaatactgtgtttgtcaaaatctgtctgagtcactgggaactctctgcccttcaaag
ggacttctttttgtaccaccaaacatagacaggaggactgttgaactccgacttgggggc
aactttattattaacatcagcagacaggactttgccaacatgactggccttgttgacctg
acattgtctaggaataccatcagttacatccagccctattcctttgttgatttagaaagc
ctacgatctttgcatttagacagtaataggttgcctgaaattggggaggacattttgagg
ggcttgattaaccttcagcacttgattctaaacaacaaccaactaaattatatttcagat
gatgcttttgaagagtttctatttactttagaagatctggatctttcttataataacctc
aaaagcatcccttgggaatccatcatgaagatgataaacttgcaccagattagtttggat
cataatttgatcgattatatcacagaggggacctttgcagatctacagaaactagccaga
gtggatctaacgtccaacagacttcagaagcttcctcctgatcccatttttgccaggtct
caaatatctccattaactacaactccattttccccacctttatctttaagctttggcgga
aaccctttgcattgtaactgtgagctactgtggctacggcgcctggacagggatgatgat
atggaaacgtgtgcttctcctccaggtttaaagggaagatatttttggtatgtccgggaa
gaggaatttgtttgtgagccccctctgattacacagcatactcacaaatttgtagtttta
gaaggacaaactgccactttgaagtgcaaagcaattggagacccatctcccatcattcac
tgggtggcaccagatgatcgacttatgggcaattcttcaagaacaatagtttatgacaat
ggcactttggaaatccttatcacaacctcaaaggatcttggagtattcacatgcatagca
gcaaatgctgctggagagtctactgcaacaattgagttatccattgtgcagcttccgcat
ctcagcaatggtacaggccggacagcccctcctaaatcaagactttctgacatcacaagt
tccagcaagtctaatcgaggagaaagcaaggggccaccagacagggcagtcttggtttct
gaggtgaccactagttcagctttagtcaaatggacagttagcaagtcagcaccaagagtt
aaaatgtaccagctacaatataactgctctgatgatgaagttctgatttatcggatgatt
ccagctacaaataaagcattcgtggtgaacaacctggtttctggaacaggctatgatctt
tgtgttctggccctgtgggatgacactgccacaacgctcactgctaccaacattgtaggc
tgtgcccagttctacaccaaagaggactatccccagtgccagtccatgcacagccagttt
ctgggtgggaccatgattttaatcattggaggcatcattgtggctactctgctggtattt
atcatcatactgatggtgcggtacaagatttgcaacaacaatcctggcaagatggccaat
gttagcaatgtctattctcaaaccaatggatctcaacctgtccagaacggagtcctgcca
caagtgaatcccaaagttgtggtaaagaatgaactcatggagtttaactgtgagtcagca
cacagcagcatctcttcttcctctagttccatgaacagccgtgactgtgatggttatagc
ctccaaagtgagcagggcacattgtccagtaaatggaggcccccgtcaagatcaaagcat
cacaatattgatcggctcatgggagcttttgcctctctggacctgaagtgtcagaaaaag
gaggaaacaatagactcaagaacttccatagtggtccgtcactcagacaaggagccactt
ttgggtcagcaggaatccaaatttcgcagcctcctcatgttgccactggagggtaaaact
aaacgtagccattcttttgacatgggggacttttccacttctcagtgttacaactacccc
aaaaagatcacaaacatttggacaaaacgtagtttgtcagtgaatggtatgcttttacag
tacaatgacagtgacctgacagaatcaaaaggaacttatgggagctctgagtgggtcatg
gaaagcacagtgtaa
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