Thamnophis sirtalis (common garter snake): 106556273
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Entry
106556273 CDS
T06107
Name
(RefSeq) chondroitin sulfate synthase 3-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tsr01100
Metabolic pathways
Module
tsr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
106556273
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsr01003
]
106556273
Enzymes [BR:
tsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
106556273
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
106556273
Glycosyltransferases [BR:
tsr01003
]
Glycan extension
O-Glycan
106556273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Fringe
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
106556273
NCBI-ProteinID:
XP_013930743
UniProt:
A0A6I9Z156
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MTEGTPLIFHLYLGQTGLGNTEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECL
QEMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFHENYERNRKGYIQDLHNSKIHTAITL
HPNKRPAYQYRLHNYILTRKISELRYRTIQLHRESALMSKLGNDEISKEDQLLGMTPSFS
RFQPRDRNEVIEWDFLTGKLLYSIAENQPPRQNINNIQRAALDDTVMQVMEIINENSKSR
GRLIDFNEIQYGYRRVDPLHGVEYILDLLLLYKRHKGRKVTVPVRRHAYLQQLFSKPFFR
EEEELDVRSVMENEPSDTQSLSLLSNSLKMFSPFKDTKELRESNTKKIHILVPLTGRYNI
FLRFMENFEKTCLVTKQNVRLAVILFSPDSSQESSKHIELINAYRNKYPMADITVIPMSG
AFSRGLGLETASSRFDNDTLLLFCDVDLIFTPDFLQRCRANTIQGEQVYYPIIFSQYDPK
VTYGGHPPVDSYFVFTKKTGFWRDYGFGITCIYKSDLINVGGFDTSIQGWGLEDVDLFSK
VVTSGLKAFRSQEVGVVHVFHPVHCDPSLESKQYKMCLGSKASTFGSAMQLAEIWLEKHL
GLRYNHTFS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaggaactcctctaatttttcacctttatttgggacagacaggactaggaaat
acagaagaacttggaaaattgggtcttgaaccaggagagaacttctgcatgggaggacct
ggaatgatcttcagtcgtgaggttctcagaaggatggtaccacatataggtgaatgtctt
caggagatgtacacgactcatgaggatgtggaagtgggcagatgtgttcggcgatttggt
ggtactcagtgtgtctggtcatatgagatgcagcaattgttccatgaaaactatgaacgc
aaccggaaaggttacatacaggatcttcacaacagcaaaattcacactgcaattacgctt
catccaaataaaaggccagcctatcagtataggcttcataactacatattgacccgtaaa
atttcagaattgcgttaccgcaccatccagctccatagagaaagtgctctcatgagtaag
ctcggtaatgatgaaataagcaaagaagatcagcttctgggaatgacgccgtcgttcagt
cgtttccagccccgtgacaggaatgaagtcattgaatgggattttctgactggaaagctc
ctttattcaatagctgagaatcagccacctagacaaaacattaataacatccagcgagca
gcattagatgacactgtaatgcaggtaatggaaataatcaatgagaactctaaatctaga
ggaaggcttattgacttcaatgaaatacagtatggataccgcagggttgaccctctgcac
ggtgtagagtatattctggatttgctgcttttatataaaaggcacaaaggaagaaaggtc
actgttccagttcggagacatgcttaccttcaacaattatttagtaagccttttttcaga
gaggaagaagaactggatgtgagaagtgtgatggaaaatgagccgagtgacacacaatcc
ctctctctcctttctaattctctgaagatgttctcgccatttaaagacaccaaagaatta
agggaaagcaataccaagaagatacacattcttgtccctctcacaggaagatacaatatt
ttcttgagatttatggagaattttgaaaagacttgccttgttacaaagcagaacgtgcgg
ctggcggttattctctttagcccagattctagtcaggagtccagtaaacatatagaattg
atcaatgcatatcgcaataagtatccaatggcagacatcactgttattcctatgtcagga
gctttttcaagaggtttgggtcttgaaacggcttcctctcggtttgataatgatacgttg
ctactattctgtgatgttgacctaatatttactcctgactttcttcagcggtgtcgagct
aataccatccaaggagaacaagtttactaccctattattttcagccagtatgaccccaaa
gtaacctatggaggccatcctcctgtggacagttattttgttttcactaagaaaacaggg
ttttggagagattatgggtttggtatcacttgcatttataaaagtgatcttataaatgta
ggcggatttgatacttcaattcaaggttggggactcgaggatgtagaccttttttctaaa
gtagtaacttctggcttgaaggcatttagaagccaagaagtgggagttgtgcatgtgttc
catccagttcattgtgatcccagtctagagtctaaacaatacaagatgtgcttggggtct
aaagcaagtacatttggctctgcaatgcagctagctgaaatatggctagaaaagcattta
ggtcttaggtataatcatactttctcctga
DBGET
integrated database retrieval system
