Thamnophis sirtalis (common garter snake): 106556277
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Entry
106556277 CDS
T06107
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106556277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106556277
03036 Chromosome and associated proteins [BR:
tsr03036
]
106556277
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106556277
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106556277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
106556277
NCBI-ProteinID:
XP_013930749
UniProt:
A0A6I9Z3E5
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MSSFQASQLPLLSRRAEVTLDGVWPTDKTSRCLIKSPERLTEMNYEGRLEAVSRKQGAQF
KEYRPETGSWVFKVAHFSKYGLQDSDEEDEDNLAKVEAKKLKTAQVPLPGQLIAQQMAAA
GKLAPPSKSPEADHLGKGVEFDSDMADITQELLPESMAEENLAEEQEPVPASTHIASSLD
INPHTLQIMKASLLADEEELDWMADPQFGQPAAEMDPSQEVCSPRLPISSSRGWKGRPPG
SRLLQSRLSTGSFLLSSASLQDRRSPRTSSLGGALAAPPWAALSPLASAFVLPRSAPEAP
LRTVGVRRQPGLVALKKSVAYGKGRLLKDMALFVGRSFRVGWGPNWVLAHSGDRLSPLGE
PEDHGEATEYGFLPAPVAPKQVSESPFKVHLEKLTVEGKATDRFYLPPLEIKLKHSTVHL
DDPCPFLAPNPGVAAIHEYAAWASEASEGAEEEEGGGGVVRAWGLVWRLCEALWGHLKEL
EGRLEEPREYGLLLERRRAFSHWLSRTADERIQEEVSLRQNDSPAEAVFSYLTGKQIGNA
CRLAQQSGDLRLSLLLSQLVGSQEVRELLALQLADWHQLQADGFIQDERLRIFCLLAGKP
VWQLSEKRTINVCSQLDWKRSLGVHLWYLLPSTAPLSKALSMYEAAFQASPDGEKYACPP
LPPYLEDAGCVAENDNAQRPLRDVCFHLLKLYSDRCYDLHQLLDPRSVTADPLDHRLSWH
LWEALRTLNYTHLSEQCQGVLNASYAAQLEREGLWEWAVFVLLHTPNAQTRERAVRELLN
RHCKLLELPESGEKEAFLTQKLCVPPEWIYEAKALWARREGDKTREALYLFKAGHWNQCH
QLVVRHLASDAIINENYTYLKGLLEDLASPERCSLIQGWDTAGLVFLDYLQVIEMVSRIQ
QLDCTGYELEEIHSKVISLCGRIELVQCHSAKDRLAQSEMAKRNADILRVVLSLQHPPDP
ASSTTPDVQRVPLRLLAPHISRLPMPEDYALEELRGLTQSYLRELMVVAQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatttcaggcctcccaacttcctctcttgagcaggcgagccgaagtcaccttg
gacggagtttggcccacggacaaaacctcgcgttgcttgatcaagagcccagaacggctg
acagaaatgaactacgaaggccggctggaagctgtctctcggaagcagggagcccagttt
aaggagtaccgccccgaaactggttcctgggtattcaaggtggcccacttctccaagtac
ggcctgcaagactccgatgaggaagacgaggacaacctggccaaagtggaggctaagaag
ttaaaaacggctcaggtgcccttgccgggccagctgatcgctcagcaaatggctgcggca
gggaagttggcgcctccttccaagagccccgaggccgaccacctggggaagggagtcgaa
ttcgacagcgacatggcagacatcacccaagagctgcttccggagtccatggcggaagag
aacctggcggaagaacaggagccggtaccggcctcgacccatattgcgtcctccctggac
atcaaccctcacacgctgcagatcatgaaggcttctttgctggcagacgaggaggagctg
gactggatggcggatccccagtttggccagccagctgcagaaatggacccttcgcaagag
gtctgctctccgaggctccccatctcctcctctcgagggtggaaaggccgccccccaggt
tccaggctgctgcagtccagactctccaccggctctttcctgctttccagcgcctccctc
caggaccgccgcagcccgaggacttcctccctgggcggggctttggccgccccgccttgg
gctgctctttcccccctggcctccgccttcgtcctgccgcgctcggctcccgaagcgccc
ctgagaaccgtgggggtccgcaggcagccgggcctggtggccctgaagaagtcggtcgcc
tacgggaaggggcggctgctgaaggacatggccctcttcgtgggacgctccttccgggtg
ggctgggggcccaactgggttctggcccacagcggtgaccgcttgagccctctgggcgag
ccggaggaccacggggaggccaccgagtacgggttcttgccggcccccgtggcaccaaag
caggtctccgagtcccccttcaaggtccacctggagaagctgaccgtggaggggaaggcg
accgaccgcttctacctcccgccattggagatcaagctgaagcacagcaccgtccacctg
gatgacccctgtcccttcctggcccccaacccgggcgtggcagccatccatgaatatgcc
gcctgggcctcggaggcctcggaaggcgcagaagaagaagaaggaggaggaggggtggtg
agggcctggggcctagtctggcgcttgtgcgaggcgctctggggccacctgaaggagctg
gaggggcgcctggaggagcccagagagtacgggctgctgctggagcgccggagggccttc
tcccactggctctcccggacggcggacgagcggatccaggaggaggtctccctccggcag
aacgacagccccgccgaggccgtcttcagctacctcaccgggaagcagatcggcaacgcc
tgccgcctggctcagcagtctggggacctgcgcctctctctgctcctctcccagctggtg
gggagccaggaggtccgggagctgctggccctgcagttggccgactggcaccagctccaa
gctgacggcttcatccaggacgagcggctgcgcattttctgcctcctggctggcaaaccg
gtgtggcagttatccgagaagagaaccatcaacgtctgctcccaactggactggaagcgc
tcgctcggggtgcacctctggtacctgctgccttccacggcccccctttccaaggccctc
agcatgtacgaagccgccttccaggcctccccagatggagagaagtatgcctgcccccca
ctgcctccctacctagaagacgccggctgcgtggcggagaacgacaacgcacaacggccg
ctgcgagacgtgtgtttccacctgctgaagttgtatagtgacaggtgctacgacttgcat
cagctgctggacccccgcagcgtcaccgcagaccccctggaccaccgtctcagctggcac
ctgtgggaggccctccgcaccctgaattacacccacctgtcggagcagtgccagggggtg
ctgaacgccagctacgccgcccagctggagagggaggggctgtgggagtgggccgtcttc
gtcctgctccacacccccaatgctcaaacgcgggaaagagccgtgcgggagctgctgaac
cgccactgcaagctgctggagctgcccgagtccggggagaaggaggccttcctgacgcag
aagctgtgcgtgcccccggagtggatctacgaggcgaaggccctgtgggcccggagggag
ggggacaagacccgcgaggccctctacctcttcaaggccggccactggaaccagtgccac
cagctggtggtcaggcacttggcttctgacgccatcattaacgagaattacacctacctg
aagggcctcttggaagacctggccagccccgagcgctgcagcctcattcagggctgggac
acggctgggctggttttcttggactatctccaagtcatcgagatggtcagcaggattcag
cagctggactgcaccggctacgagctggaggagatccactccaaagtgatctccctctgc
ggcaggatagagctggtccagtgtcacagtgccaaggacaggctggctcagtcggagatg
gccaagcgcaacgcagacatcctccgtgtggtgctgagcctgcagcaccctccggacccg
gcctccagcaccacccccgacgtgcagagggtccccctgcgcctactggccccccacatc
agccggctgcccatgccagaagactacgcgctggaggagctccgcgggctgacccagtcc
tacctgcgggaactgatggtggtggcccagtga
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integrated database retrieval system
