Thamnophis sirtalis (common garter snake): 106556299
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Entry
106556299 CDS
T06107
Name
(RefSeq) nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106556299
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
106556299
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NCBI-GeneID:
106556299
NCBI-ProteinID:
XP_013930768
UniProt:
A0A6I9Z184
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Position
Unknown
AA seq
727 aa
AA seq
DB search
MSQLLASPINRSSHASHPSQDRLQPAREPEQSQVAIAHLESDLSYNPQLEDGSTLDQLQE
LPFTPVHMPILALGGAPSRSPNTAPTRASLARLRAAGFPELLDCNKEPVEMLDPNDHAPC
SPQREEGDPLPDHEIHLQFLALSRPAQDDPATWPQSVYFTLQFYRFPPVTTPRLQLVQTP
ACGPATHILVKINPDGSPNLGPPGLHLKYLVGVASLKPGEPRWFLRYLAQQALQIDVWDG
DSLLLLGSAAVKLKHLLRQGRTGVQIYHELEVLTVEYKPDATVLSGEAFRPWGVKPIGVH
AVVRGQLHLRLANIGQRCGQTLRRSHSLPPSQRRVISSQDGARGFPGGSLVSISTHRAGN
VCQAKKLADVDSELAALLFSRLREASSALQPASQEGGLTRRRKLERMLSVRRKESQEGDV
GRKSSFILGRHEDRVQHSRDLQVIEAYRERIKAESITSMLCQAITTHHVLYATLGTAEFF
EFALKNPYSVQHTVTIRIDHPELSVILDVREWRHFKELTQTVTPLEEDMFHLHNGLTPQV
YLRPKETVYIPFKYQTFSMEQTAMMQQGPPQPTSKEGEKIPTAATSGKFSETQRIKVTGL
EVMDGPHVLSMGWKDFFCHLAEVGSLWVGQWPKSMGQQEDHGPKLREGVSWIIFISFISS
SSLLFVLLSSPSASPPSLLLFPVFFSASSLLLLLSSSSSSPSASPPSLLLFPVFFSASSL
LLLLSSS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaactgttggcctccccgataaacaggagcagccacgcatctcatccgtcccag
gacagacttcagccagccagagagccggagcagagccaagtagccatcgctcacctggag
tccgacctgagttacaaccctcaactggaggatggctccacccttgaccagctgcaagag
ctccccttcacgccggtccacatgcccatcctggccctcgggggagccccttcgcggagc
cccaacaccgcccccactcgggcctctctcgcccgcctgcgcgcagctggattcccggag
cttctggattgcaacaaggagccggttgagatgctggaccccaacgaccacgccccctgc
agcccccagcgggaagaaggcgaccccttgcccgaccacgagatccacctccagttcctg
gccttgagcaggcctgcccaggacgaccctgctacctggccccaaagcgtctacttcacc
ctccagttttaccgcttccccccggtcaccacgccgcggctgcagctggtccagactccg
gcctgtgggccagccacccacatcttggtgaagatcaacccagacgggagcccgaatctc
gggccccctggcctccacctgaagtacctggtgggcgtggcctccctgaaaccaggtgag
ccgcgctggttccttcgctacctggcccagcaggccctgcagatcgacgtctgggacggg
gactccctcctcctgctgggctctgccgccgtgaagctgaagcatctcctgcgccaagga
cggacgggggtccagatctaccacgagttggaggtcctgactgtggagtacaaaccagat
gcgaccgtgctgagtggggaggccttccgcccttggggggtcaagcccatcggggtccac
gcggttgtgaggggtcagcttcacctccgcctggcgaacattggacaacggtgtggacag
acgctacggaggtcacactcattgcctccttctcagaggcgggtcatctcctcccaggat
ggggccaggggcttccctggtggcagtttggtctccatcagcactcacagggctggaaac
gtgtgccaagccaaaaaactggccgacgtggacagcgagctggctgctctccttttctcc
cgcttgagggaagcgagtagtgccttgcagcccgccagccaggaaggcggactcacccga
cgccggaaattggagaggatgctttcggtccggaggaaggagtcccaggagggcgacgtt
gggaggaaaagcagctttatcttgggccggcacgaggaccgggttcagcactcccgagac
ctccaggtgatcgaggcgtaccgggagcgcatcaaagccgagagcatcacctccatgctc
tgccaagccatcactacccaccacgtcctctacgccacgctgggcacggccgagttcttc
gagtttgccctgaaaaatccctacagcgtccagcacacggtgaccatcagaatcgaccac
ccggagctcagcgtcatcttggacgtcagagagtggaggcattttaaagaactgacccaa
acggtcacgccgttggaggaggacatgtttcatcttcacaacggcctcactcctcaggtc
tacctccgtcccaaggagaccgtctacatccccttcaagtaccagaccttctccatggag
cagacggccatgatgcagcaaggtcccccccagccgacgtctaaggaaggtgagaagatc
cccacggccgccacttctggaaagttcagcgagactcaacgcatcaaggtaacaggactg
gaagtgatggatggtccacatgtcctctccatgggctggaaagattttttttgccatctg
gctgaggtgggcagtttgtgggttggacagtggccaaaatccatgggacagcaggaagac
catggaccaaagcttagggaaggtgtgtcctggatcatcttcatctccttcatctcctcc
tcctctcttctttttgttcttctttcttctccttctgcttctcctccttctcttcttctt
tttcccgtctttttctccgcctcctctcttcttctccttctctcctcctcttcttcttct
ccttctgcttctcctccttctcttcttctttttcccgtctttttctccgcctcctctctt
cttctccttctctcctcctct
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