Thamnophis sirtalis (common garter snake): 106556301
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Entry
106556301 CDS
T06107
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106556301 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106556301 (CHRNE)
Ion channels [BR:
tsr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
106556301 (CHRNE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
106556301
NCBI-ProteinID:
XP_013930773
UniProt:
A0A6I9Z189
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All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MQAVGSLARGFCLGLLLGWVALGSPEGNKELEIFNRLFTGYDKSRWPVQGVDEVLTVSLK
LTLTNLISLNAKEETLTTNVWITQEWLDYRLNFSSEEYGQSLRVPSDLVWLPDIVLENNI
DGNFEVAYSAXWHPMPTDQLRRHITVPSVFTGETAATYLRSLFTYERGGHVVLIPEYIFP
LGYYLIPFTGVVGVVIAVMCTILIVRCVQHRKRMRKDRLSKEQLKKIPLHKYRKENGEWA
IKKRPARRVLAPVAGLEAPGFSEIHYILIIQRKPLFYVINIIVPCVLISSLVVLVYFLPA
QAGGQKCTVSISVLLAQTVFLFLISQKVPETSLSVPLIGKYLLFVMTVATLIVTNCIVVL
NVSLRSPSTHRLSPRLKHLFLKFLPHYLGSNIGPADEDESLGAPCPRRSFSTLVKAEEYI
LKKARSEVLFEHQGQRHGLQRAPHYDGLDVEMTTMLYKSLSSLAPEIQECVDACNFISKS
TKEQNKDGAEIENWMLIGQMIDKLCFWLALLLFTIGTLAIFFMGHLNSAPEDPFPAQ
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggtgggcagcctggcccggggcttctgcctggggctcctgcttggctgggtg
gcccttgggtccccagagggcaacaaggaactcgagatcttcaaccgcctttttactggc
tatgacaagtcccggtggccggtccagggggtggacgaagtcctcacggtctccttaaag
ctgaccctcaccaacctcatctcactgaatgccaaagaggagacactgaccaccaacgtc
tggatcactcaggaatggctggactatcggctgaacttcagcagcgaggagtatggccag
agcctgcgggtcccatctgacctggtgtggctgccggacatcgtcctggagaacaacatt
gatggaaactttgaggtggcctattccgccaantggcatccgatgcccactgaccagctg
cgcaggcacatcaccgtcccctccgtcttcacgggagaaacggcggccacctacctgcgg
agcctcttcacctacgagagagggggccacgtcgtcctgatccccgagtacattttcccg
ctgggctactacctcatccccttcacgggcgtggtgggcgtggtgattgccgtgatgtgc
accatcctgattgtccgttgtgtgcaacatcgcaagcggatgcggaaggaccgtctgtcc
aaggagcagctgaagaagatccctctgcacaagtaccggaaagagaacggggagtgggcc
atcaagaagcgcccggcccgccgggtcctggcccccgtggctgggctggaggcgccgggc
ttctccgagatccactacatcctcatcatccagcgcaagcccctcttctacgtcatcaac
atcatcgtgccctgcgtgctgatctcctccctggtggtccttgtctacttcctgcccgcc
caggccggtgggcagaagtgcacggtcagcatctcggtcctgctggcccagacggtcttc
ctcttcctgatctctcagaaggtgcccgaaacgtccctcagcgtccccctcattggcaag
tacctgctctttgtgatgacggtggccaccctgatcgtcaccaactgcatcgtggtgctg
aatgtctccctgcgcagccccagcacccaccgcctctcccccaggctcaagcacctcttc
ctcaagttcctcccgcactacctgggctccaacatcggccccgcagacgaggacgagtcc
ctgggcgccccctgccctcggcgctccttctccaccttggtcaaggccgaggagtacatc
ctgaagaaggcccggagcgaggtcctctttgagcaccagggccagcgccacgggctgcag
agggcgccccattacgatgggctggacgtggagatgacgaccatgctgtacaagagcctc
tccagcctggcccccgagatccaggagtgtgtggacgcctgcaacttcatcagcaagagc
accaaggagcagaacaaggacggggcggagatcgagaactggatgctgatcgggcagatg
attgacaagctctgcttctggctggccctcctgctcttcaccatcggcaccctggccatc
ttcttcatggggcacctcaactcggcgcctgaggaccccttcccggcccagtag
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