Thamnophis sirtalis (common garter snake): 106556349
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Entry
106556349 CDS
T06107
Symbol
RINT1
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106556349 (RINT1)
Membrane trafficking [BR:
tsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
106556349 (RINT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINT1_TIP1
Phasin
DUF7226
Motif
Other DBs
NCBI-GeneID:
106556349
NCBI-ProteinID:
XP_013930818
UniProt:
A0A6I9Z1D5
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MAQSGIKSAASLAVTEPEPSREEEEEEGEEETEYPAEADEFLSTTTDCVKVGNLNTGNKK
IPKDPETCDIPFYVSEFVERKVGNDYDSLSKLGELIEQLSKNKMKLEEQVVTVSSEVPKR
IQKALQNAEDSKKSLDQLLESEGILHDLVNSHLLSSGPWMEEFGALISQIKEVERHLAYL
KQISQVEELSDNIQQYLMTNNVPEAATALASMAELDIKLQESSCSHLLTFIRSTIQFWHK
ILKDKLSSDFEETLTQLHWPFIGPAQTKNLGLAPSSTNAAEIYSNFENLFSQLLKLQPSD
ELLTKPKQLPEKYLLPPTPPIILPMQIMLAPLQKRFKYHFTGNRQTNVLTKPEWYLTQVL
MWIGNHVSFLEGKVQPILDKAGTSVNARLEFSRALVTLILEKLDAEIPCMLYDDNLFCHL
VDEILLFERELHGVHGYLGSLPSCMHILSEETYFQRWLTVERKFALQKMDSMLSSETAWV
SQYKDITDVDEMKVPDCAETFMTLLLVITDRYKHLPTAARKLWFLELQKELADDFRIRLT
QVMKEETRTPLAFRYCAILNAVNYIATVLADWADNVFFLQLQQAALELSAESDTLSKLQL
GQLASLESSVFDEMIHLLERLKHDMLTRQVGHVFKEVKEEAKIYKRERWLSLPSQAEQAV
MSLSSSACPLLLTLRDRLLQLEQQLCYTLFKIFWQMLAEQVDLFIYQEVILANHFNEGGA
AQLQFDMTRNLFPLFSHYCKRPENYFKHIKEACIVLNLNIGSALLLKDVLQSDTETRSGI
AFGSKQPTAVAALNELGIYKLAPKDVEILLNLRTNWPNTGR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagggattaaaagtgctgcatcgttggcagttactgagccagaacccagc
agagaggaggaggaggaggaaggggaagaagaaacagaatatcctgcagaagccgatgag
ttcctgagtactaccaccgattgcgtgaaagtgggaaacctgaacactggaaacaaaaag
attcctaaagaccccgagacctgtgacatcccgttctacgtgtccgaattcgtagaaagg
aaggtcgggaacgattacgactcgttaagcaagcttggggagctgatcgaacagttgtca
aaaaacaagatgaaattagaagaacaggtcgtcacggtttcatccgaagttcccaaaaga
atccagaaggcgttgcagaacgcggaagattcgaagaaatctctggatcagcttctggag
agcgaaggaatcttgcacgatttggtgaatagccacctgttgagctccggcccttggatg
gaggaatttggtgccttgataagtcaaataaaagaagtcgaaagacacctggcttattta
aaacagatttcacaagtagaagaattgagcgacaacatccagcagtatcttatgactaac
aacgtgcctgaggcagctactgcgttagcttccatggctgaattagacatcaagcttcaa
gaatcctcctgctcgcatctcttaacttttataagatctactattcagttctggcacaag
atcctgaaagacaaattgtccagtgacttcgaagagacgctgactcagctgcactggcca
ttcatcggaccagctcaaaccaaaaatttgggcctggctccttcctccacgaatgccgca
gaaatctacagtaacttcgaaaacttgttttctcagctcctcaaactgcagccctcggac
gaactattaaccaaaccgaagcagctgccagaaaagtacctccttccgccaactccgcct
attatattaccgatgcagatcatgttggctcccctccagaaaagattcaaataccatttc
acggggaaccggcaaaccaacgtcttgaccaagcccgagtggtatcttacgcaagtactg
atgtggattggaaatcacgtttcgtttctggaaggcaaagttcagcccatattggataaa
gccggaacttcggtgaacgccaggttggagttttcccgcgctctggtgacgctcatcctg
gagaagctggacgccgagatcccttgcatgctgtacgacgacaacctcttctgccacctg
gtggacgagatcctcctcttcgaaagagaactgcacggcgttcacggttatctcggcagc
ctccccagctgcatgcacattttgtcagaagaaacctactttcagaggtggttaaccgtg
gagagaaaatttgctcttcagaagatggactccatgctttcgtcggaaactgcatgggtc
tcccagtacaaagacatcactgatgtagatgagatgaaagttccagactgcgcagaaacg
tttatgactctgcttctggtgatcaccgatagatacaagcaccttcctacagcagccaga
aaactgtggttcctggaattgcagaaagagctggcggacgactttcgaatccggctcact
caagtcatgaaggaagaaaccagaacgcccctggccttccgatactgcgcgatcctaaac
gcggtcaactacattgccaccgtactagcggactgggctgacaatgtttttttcttacag
cttcagcaggctgcgctggaattgtccgccgaaagcgacacgctaagcaagctgcagttg
ggacagctggcttcgctggagagctccgtgttcgacgaaatgatccacctcctggaacgg
ttgaagcacgatatgctcactcgccaagtcggtcatgtcttcaaggaggtcaaagaggag
gccaagatatacaaaagggaaaggtggctctccttgccttcccaggccgaacaagccgtg
atgtccttatcgagcagcgcctgtcccttgctcctgaccttgagggaccggctccttcag
ttagagcagcagctttgttacaccttgttcaaaatcttctggcaaatgctcgcggagcaa
gtcgacttgttcatctatcaggaggtcattctagccaatcacttcaacgaaggtggagca
gcccaactccagttcgacatgacccggaatcttttccctctgttttcccattactgcaaa
cggccggagaattatttcaaacacatcaaagaggcttgcattgtactgaacctaaacatc
ggatcagccctgctgttgaaggacgtgctccaatcagacaccgaaaccagaagcggaatc
gcctttggttcaaaacaacccactgccgtggcggcgttaaatgaacttggaatttataag
ttggctccaaaggatgttgagatcctccttaatttgaggacaaattggcctaacactggc
agataa
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