Thamnophis sirtalis (common garter snake): 106556372
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Entry
106556372 CDS
T06107
Symbol
JAG1
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04330
Notch signaling pathway
tsr04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106556372 (JAG1)
04371 Apelin signaling pathway
106556372 (JAG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tsr04090
]
106556372 (JAG1)
CD molecules [BR:
tsr04090
]
Proteins
106556372 (JAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_DL_JAG
EGF_2
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
cEGF
EGF_3
CD34_antigen
IN_DBD_C
Motif
Other DBs
NCBI-GeneID:
106556372
NCBI-ProteinID:
XP_013930842
UniProt:
A0A6I9Z2I5
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MLLSKRRSQLTEFSLSLFLALLCLRVKVTLTSGQFEFEIISMQNVNGELQNGNCCDGTRN
PIDKKCTRDECDTYFKVCLKEYQSRVSAEGACSFGLGSTPVIGGNTFNLRYSRNNERNRI
VLPFSFAWPRSYTLLVEAWDYSNDSASADSIIEKASHSGMINPSRQWQVLKQNSGVAHFE
YQIRVTCDEHYYGFGCNKLCRPRDDFFGHYTCDQNGNKTCLEGWMGPDCNKAICRQGCNP
RHGSCKIPGECRCQYGWQGQYCDKCIPHPGCVHGTCNEPWQCLCETNWGGQFCNKDLNYC
GTHPPCLNGGTCSNTGPDKYQCSCPEGYSGQNCEIAEHACLSDPCHNGGSCLETPTGFEC
VCALGWAAPTCMLNIDDCSPNPCGHGGTCQDLVDGFKCVCPPQWTGKTCQIDANECEGKP
CINANSCRNLIGSYYCNCIAGWTGQNCETNIDDCVGQCQNGGTCKDLVNGYRCLCPPGYI
GDHCERDINECASNPCLNGGHCQDEINGFQCLCLAGFSGNICQLDVDYCEPNPCQNGAQC
FNYESDYFCSNCPDDYEGKNCSHLKDHCRSTPCEVIDSCTVAVASNSTPEGVRYISSNVC
GPHGKCKSQSGGKFTCECNKGFTGTYCHENINDCQSNPCKNGGTCIDGINSYKCICSDGW
EGTFCEANINDCSKSPCHNGGTCRDLVNDFFCECKNGWKGKTCHSRDSQCDEATCNNGGT
CYDEGNVFKCMCPAGWDGATCNIARNSSCLPSPCHNGGTCVVSGESFTCVCKEGWEGPTC
TQNTNDCSPHPCYNNGNCVDGENWYRCECAPGFAGPDCRININECQSSPCAFGATCIDEI
NGYRCICPPGRGGPICQEVSGRPCIASGHIIPDGSKWDDECNSCQCVNGKVSCSKVWCGP
KPCVINAKGHSECPAGHTCHPVKADHCFVPPCDNAGECWPSNQQPVKMTCSSDSYYQEHC
ANITFTFNKEMMTPGLTTEHICSELRNLNILRNVSIEYALYITCEPSHLASNEIHVAISA
EDIQEENNPVKEITDKIIDLVSKRDGNSTLIAAVAEVRVQRRPIKSKTDFLVPLLSSILT
VAWICCLVTAFYWCIRKRRKQSTHTHTASEDNTTNNVREQLNQIKNPIEKHGANAVPIKD
YENKNSKIAKIRTHNSEVEEDDMDKHQQKTRFAKQATYTLVDRDEKPPNGTPTKHPNWTN
KQDNRDLENAQSLNRMEYIV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcttttatcaaagagacgatcgcagctcacggagttttccctaagtctttttcttgcg
ctattatgcttgcgagtcaaggttactctaacatcgggccagttcgagtttgagatcata
tccatgcaaaatgtaaacggcgaattgcaaaatggaaattgttgtgatgggacccgaaac
ccaattgataaaaaatgcaccagagatgaatgtgatacctatttcaaagtttgcctgaag
gagtatcagtcccgcgtttctgctgagggcgcttgcagctttggattgggatctacccct
gtcatcggtgggaatacctttaatttaagatacagccggaataatgaaaggaaccggatt
gtcctccctttcagttttgcctggccgagatcctacacgttactggttgaagcctgggat
tacagcaatgacagtgctagtgcagatagcattattgaaaaggcatcacattccgggatg
atcaatccaagccgtcagtggcaggtcttgaagcaaaattctggcgtagctcattttgaa
taccagatccgggtcacctgcgatgaacactactatggttttggatgcaacaaactttgt
cgaccaagagatgacttctttggacactatacttgtgatcagaatggcaataaaacctgc
ttggaaggctggatgggaccagactgcaacaaagcaatctgtcgccagggttgcaacccc
agacatggttcttgtaaaatacccggcgagtgcaggtgtcagtatggatggcaaggccag
tactgcgataagtgcattccacacccaggctgtgtccatggcacttgcaacgaaccgtgg
caatgtctctgtgaaaccaactggggtggccaattctgcaataaagatctcaactactgt
gggactcacccgccttgtttgaacggagggacctgtagcaacacaggccctgacaaatac
cagtgttcctgccctgaaggctattcgggacaaaactgtgaaattgcggaacacgcctgt
ctttcggatccttgccacaacggaggaagctgccttgagacccctactggatttgaatgt
gtctgtgctctaggctgggcagcaccaacctgcatgcttaatattgatgactgttctcca
aacccctgtgggcatggagggacttgccaggatctagttgatggatttaaatgtgtttgc
ccacctcagtggactgggaaaacatgtcaaatagatgccaatgaatgcgagggcaaacct
tgtatcaatgccaattcctgcaggaacctgattggtagctattactgcaattgcattgct
ggctggactggccagaattgtgagacaaatattgacgactgtgtgggacagtgtcagaat
ggaggaacttgtaaggatttagtgaacggttatcgctgtctctgtccacctggctatatc
ggggatcactgtgagagagacatcaatgagtgcgcaagcaacccttgtttgaatgggggc
cactgccaagatgaaatcaatggcttccaatgtctctgcctggctggtttctcgggaaac
atctgtcagttggacgtagattattgcgagcccaacccttgccagaatggggcccagtgc
ttcaattacgagagcgattatttctgcagcaactgtccggatgattacgagggcaagaac
tgttcccacctcaaagatcactgccgctcaactccttgtgaagtgattgacagctgtact
gttgctgtcgcttccaacagcaccccagaaggggttcgctatatctcttccaatgtttgt
ggccctcacggcaagtgcaagagccagtcgggcggcaagtttacttgtgaatgcaacaaa
ggcttcactggcacctactgtcatgaaaatatcaatgactgtcagagcaacccatgtaaa
aatgggggcacgtgcattgacggcatcaactcctacaagtgtatttgtagtgacggctgg
gaaggcaccttctgtgaagcaaatatcaatgattgcagtaaaagcccttgtcacaatgga
gggacgtgccgagacttggtcaatgactttttctgtgaatgtaaaaatggctggaaaggg
aaaacttgccactcacgtgacagtcagtgcgacgaagccacgtgcaacaacggagggacg
tgttacgatgagggcaacgtcttcaagtgcatgtgccctgcaggatgggatggagccact
tgcaatatagcacgcaacagcagctgcctgccaagcccctgccataatgggggaacatgc
gttgtaagtggagagtctttcacatgcgtttgcaaagaaggctgggaaggacctacgtgc
acgcagaatacaaatgactgcagtccacatccttgctacaataatggaaactgtgtggat
ggagaaaattggtaccgctgtgaatgtgctccaggttttgcaggtcctgactgcagaata
aatatcaatgaatgtcagtcttcaccttgtgcttttggagctacatgtatagatgaaatc
aatggatatcgctgtatttgtccacctggccgcggtggtcccatatgtcaagaagtttca
ggaagaccctgcattgccagtgggcatattattccagatggttcaaagtgggatgacgaa
tgcaacagctgtcagtgtgtgaatggaaaagtctcctgttctaaggtctggtgcggccca
aagccttgtgtgataaacgccaagggccacagtgaatgtcccgcaggccacacctgtcat
cctgttaaagccgatcactgctttgtcccaccctgtgacaacgcgggcgaatgctggcca
tcgaatcaacagccggtgaaaatgacctgcagctctgattcttactaccaggaacattgt
gctaacattaccttcaccttcaacaaagagatgatgactccaggtctgacaaccgagcat
atctgcagcgagctgcggaacctgaatatcctgaggaatgtctccattgaatatgctctg
tatatcacctgtgagccatcgcatttggcaagcaatgaaattcacgtggcaatctctgct
gaagatatccaggaggaaaataatccagtaaaggaaataactgataaaattatcgatctg
gtcagcaaacgtgatgggaatagcacccttattgcagctgttgcagaagtccgggtccag
aggcggccaattaagagcaaaacagatttcttggtcccgttactcagctccattttaact
gtggcttggatctgttgcctggtcactgccttttactggtgcatccggaagcggcgaaag
cagagcactcacacacacaccgcctcggaagacaacaccaccaacaacgtgcgggagcaa
ctgaaccagatcaagaaccccatagagaaacacggggccaatgctgtgccgatcaaagac
tatgagaacaagaactccaaaattgccaaaataaggacacacaattcagaggtggaagaa
gatgacatggacaagcaccagcagaaaacccgatttgccaaacaggcaacctacacgtta
gtagacagagatgaaaagccacccaacggcacgcctacaaaacacccaaattggacaaac
aaacaagacaaccgggacttggaaaatgcacaaagcctaaaccgaatggaatatattgta
tag
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integrated database retrieval system
