Thamnophis sirtalis (common garter snake): 106556503
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Entry
106556503 CDS
T06107
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04810
Regulation of actin cytoskeleton
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106556503
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106556503
09142 Cell motility
04820 Cytoskeleton in muscle cells
106556503
04810 Regulation of actin cytoskeleton
106556503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106556503
Cell adhesion molecules [BR:
tsr04515
]
Integrins
Integrin alpha subunits
106556503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
106556503
NCBI-ProteinID:
XP_013930971
UniProt:
A0A6I9Z4S3
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
NQFVPNGALKDLPGYQNSRFGSCIASVPDLNQDSYSDVVVGAPLEDEHQGALYIFHGYRE
NLIRKYKQRIAAADLSPGFMYFGSSIHGNLDMNEDKLVDLAVGSRGSAVLLWSRSVVQIN
ATLQFEPSKINIFTKDCVRNGKEATCLSAFVCFTAVFLSAHFQSAHVALNYNLTIDERRY
VPRAYLDENGERLAHKAATLLARQEHCDSMDFHVLDTADYVKPVTFSVDYALKSPETGPV
MDDGWPTSLKVAVPFWNGCNEDEHCIPNLVLDAKTDVPTAMEYCRRVLRKSHSDCSAYTL
SFDTSIFVIESARRRVAVEALLENRGENAYNTILNISFSRNLQFASLIQKDDPDINIECM
SEEKHSNSRVCNVSYPFFRAKTKVAFRLDFEFKKSIFLQNLEIFLNASSDSEEQETTKED
NSALLKFQLKYETDLLFTRSSSQNYYEIEPNNSLQTYDRIGPPFNCTFKLQNLGLFPVDG
IVIKITVPVATRGGNRLLHLTGFHGPENGMMCNIGGNNTDYRMTPSDEDLGRHPQLNYSN
SDVISIDCSVNLAANQEVSFLLYGNLWMRTLGVLKFKTLRCIFNAALQRGFRSAFVFREE
DPSRQIAFEISKVEEPHIPIWIIIGSTLGGFLLLALLVLALWKLGFFQSATRKRDASQDQ
TAKDLD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
aaccagtttgttccaaatggagccctgaaggacttgcctggctatcagaattccaggttt
gggtcctgcattgcctctgtgcctgacttgaaccaggattcttacagcgatgtagttgtg
ggagcacctctggaggacgagcatcagggagccctgtacatcttccacggttatagggaa
aacctgatccggaaatataaacagagaattgcagctgccgacctttctcctggctttatg
tattttgggagcagcatccatggaaacctggatatgaatgaagacaagctggtggatctt
gctgtgggctcccgtggaagtgctgtcctattatggtcccgcagtgtggtccaaatcaat
gccaccctccagtttgagccctccaaaatcaacatcttcaccaaggactgtgttcggaat
ggcaaggaggccacctgtctgtcagcctttgtttgcttcactgccgtttttctctccgct
cattttcagtcagctcatgtagcattgaattacaacctcaccattgatgaacgacgatat
gtgccacgagcctacctggatgaaaatggagagagacttgcccacaaggcagccaccttg
cttgccaggcaggaacattgtgacagtatggattttcatgtcttggatacagcggattat
gtgaagccggtgaccttctctgttgattatgccctaaagagtcctgagactggaccagtg
atggatgatgggtggccaacttcactgaaagtggctgtcccattctggaacggatgcaac
gaagatgagcactgcatccctaatttggttcttgatgctaaaacagatgtcccaactgca
atggaatattgcagacgggtcctgagaaaatctcactcggattgctccgcctacacgctg
tcttttgatacctccatttttgtcatagagagtgccagaaggagggtagcagtagaagcc
ctgttggagaacagaggagaaaatgcatataacaccattctaaacatttccttctcaaga
aacctgcagtttgcaagcttgattcagaaggatgacccggatattaacatagaatgtatg
tctgaggagaaacattcaaacagcagagtttgcaatgtcagctaccccttcttccgggcc
aaaacaaaggttgcttttcgcttggatttcgagttcaaaaagtcaattttcctccaaaac
ttggagatatttttgaatgccagcagtgacagtgaagaacaagaaaccacgaaagaggac
aattctgctctcctcaagtttcagctgaaatatgaaaccgatctccttttcaccaggagt
tccagccagaactattatgagatcgaacccaacaattctctgcagacatacgatagaatc
ggcccaccatttaactgcacttttaagctacagaatctgggcctcttccctgttgatggg
atagttatcaaaatcacagtccccgtggccacacgaggagggaatcgcctgctgcactta
acaggcttccatggaccagagaatggtatgatgtgcaatattggaggcaataatacagac
tatcgaatgacaccctcagatgaggatttaggccgtcatccccagctgaactacagtaat
tctgacgtgatttcaatcgactgcagtgtgaatctggctgccaatcaagaagtcagcttt
ctcttatatggaaatttgtggatgaggaccctaggagtgctgaaattcaagacgctgaga
tgcatcttcaatgctgccttgcagagagggtttcgtagtgcctttgtcttcagagaggag
gatcctagtcgccagattgcatttgagatctccaaagtcgaagagccccacatccccatc
tggatcataatcgggagcaccttaggtggtttcctgctgctggcactcctcgtgctggca
ctctggaagcttggctttttccaaagcgccacccgcaagagagatgcaagccaggatcag
accgccaaagatttggactaa
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