Thamnophis sirtalis (common garter snake): 106556566
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Entry
106556566 CDS
T06107
Name
(RefSeq) brevican core protein-like
KO
K06795
brevican
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tsr00535
]
106556566
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106556566
04091 Lectins [BR:
tsr04091
]
106556566
Proteoglycans [BR:
tsr00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
106556566
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
106556566
Lectins [BR:
tsr04091
]
C-Type lectins
Lecticans
106556566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
EGF_TEN
I-set
Motif
Other DBs
NCBI-GeneID:
106556566
NCBI-ProteinID:
XP_013931025
UniProt:
A0A6I9Z584
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MALCRDLLLCAALAQLVSLGAAFHFVRESTDDLKALRVSISKYPPIRAVLSGSLTIPCHI
TYLRPLPTADTASRHGVRGTLRVKWTFLADGKEAEILVARGLKVKVSEIYRNRVFLPFYP
DSPTDATLVLSELRSNDSGLYRCDAQHGIEDGQDSLEVKVKGVVFHYRGGSSRYAYTFPQ
AQAACARIGAAIATPEQLHAAYRSGYEQCDAGWLADQTVRYPIHAPREACYGDMNGFPGI
RNYGVVDPDDTYDVYCYAEELYGDLFVMTSPRKFTWEEAKAACESLRVEMATTGQLYAAW
NQGMDHCNPGWLADGSVRYPIVTPREKCGGNMPGVKTLFLFRNQTGFPDPQSKFDVFCFR
EETSPSLESPVPEAEGSKEITTVTQKMEELQLPEREPEVAKESRGAIYSVPLLQDPLGVP
EEPSRAFEGAATPDPQEEGGPGGCDRRSRGQEEREESGGSCDRRHGPEREPSVEPSTEEA
LRTQKAPTPDLRQQRENGEPEVLEAAPQEGEAEDGEARDEKGPHGGHSPVEPSWETAASV
SPSPEGQTVGKVPQGPSVSPSEAATERTPSASHASRPPEEAGAGTSSARRVESSPISGPA
VPRHPSPPREAGAEPPGTSAFPGTPPVLLLLPSLSMTPAGSPEESGDHSGSSWPPPARLS
PVAVSSPPDEAAAAASKASAGLDESKEEPWAEASEEEQEPTLRTTVPAADKGGHPEAVPS
GGPLGLNFFSTPFLEASLTTTHPRPVLPTESASLGASGSVSDTCVPNPCRNGGTCTEGRG
RPGCLCLPGYGGDACNVSLRKCQPGWDAFQGFCYKHFSARRSWEDAETRCREHGGHLANI
MSPEEQSFINNQYKEYQWIGLNDR
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggccctctgccgggacctcttgctctgcgctgccttggcccagctggtgtctctgggg
gcagccttccactttgtcagggaaagcacagatgacctcaaagctctccgggtctccatt
tccaaatatccgcccatccgagccgtcctgtctggcagcctcaccatcccctgccacatc
acctacctgcggccactgcccactgccgacacagccagccgccacggggttcggggcacc
ctccgagtaaaatggaccttccttgctgacggcaaagaggccgagatccttgtggcccgg
ggcctgaaggtcaaagtcagcgaaatctaccgcaaccgagtcttcctgcccttctaccct
gactcgcccacggatgccaccctggtcctgagtgagctgcgctccaacgactccgggttg
tatcgctgtgatgctcaacacgggattgaggatgggcaggattccctggaggtgaaggtg
aagggggtcgtcttccattaccggggagggtcttcccgctacgcgtacacctttccccag
gcccaggcggcctgcgcccgcatcggggcggccatcgccacccccgagcagctccacgcc
gcctaccgcagcggttacgagcagtgcgatgccggctggctggcggaccagaccgtcagg
tatcccatccatgcccctcgcgaagcctgctatggagacatgaatggcttcccgggaatc
cgcaattacggtgtagtcgatccagatgacacgtacgacgtctactgctacgctgaagaa
ctttatggggacctgtttgtgatgacgtccccaaggaaattcacctgggaagaggccaaa
gccgcatgtgaatcgctgagggtggagatggccaccaccggccagctctatgccgcctgg
aaccaagggatggatcactgcaaccccggctggctggcagacggcagcgtgcgctacccg
attgtgacgccccgcgagaagtgcggagggaacatgcccggcgtcaaaaccctcttcctc
ttccgcaatcagacgggattcccggatccccagagcaagttcgatgtgttctgcttcaga
gaggagaccagcccctccctggagtctcccgtccccgaggcagagggcagcaaggagatc
acaacggtgacccagaagatggaggagctgcagctgcccgagagagagcctgaggtggcc
aaggagtccaggggggccatttactctgtgcccctcttgcaggacccccttggggtgcca
gaggagccgagcagggcctttgagggggcagccaccccagacccccaggaggagggtggc
ccaggcggttgtgacaggcggagcagaggccaagaagagcgggaggaaagcggtggcagc
tgtgacaggcgacatgggcctgagcgagagcccagcgtggagcccagcacggaggaggcg
ctcaggacccagaaggcccccaccccggacctaaggcaacagagggagaatggcgagcca
gaggttttggaggcagctccccaggaaggggaggctgaggatggagaggccagggatgag
aaggggccccacggtgggcacagccctgtggagccctcctgggagacggcagccagcgtc
tcccccagcccagagggacagaccgtgggcaaagtcccccaaggtccctctgtgtctccc
tcagaggcagccaccgaaaggacccccagtgccagccacgcttccaggccaccggaagaa
gctggcgcaggaacctcttctgcccggagagtcgaaagcagccccatttctgggccggca
gtccctcgccaccccagtcctccccgagaggcaggagctgagcctccagggacatccgct
ttcccagggacccccccagttctcctgctgctcccgtccctgagcatgaccccagccggc
tcccccgaagagagtggggaccactcgggctcctcctggccacctccagccaggctctcc
ccggtcgccgtctccagccctccggatgaggccgcggcggctgcctcgaaggcttctgct
ggccttgatgagagcaaggaggagccctgggctgaagcgtcggaggaggagcaggaaccg
actctgaggacaacggtgccagctgcagacaaaggagggcacccggaggccgtcccctct
ggaggccctttgggcttgaacttcttcagcacccccttcctggaggcctccttgactact
acccaccctcggccagttctgcccactgaaagtgccagccttggagcatctggcagcgtg
tcagacacctgcgtgccgaacccctgcaggaacggagggacttgcacagaaggaaggggg
cgcccggggtgcctctgtctgccgggatacggaggggacgcctgcaatgtcagcctgagg
aagtgccagcccggctgggatgccttccaaggattctgctacaagcatttctctgcccgg
aggagctgggaggatgccgagacccgatgccgagagcacggggggcacttggccaacatc
atgtctccagaggagcagagcttcatcaacaatcagtacaaagaataccagtggatcggc
ctgaacgaccgc
DBGET
integrated database retrieval system
